Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_I21
(941 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens ... 33 1.5
AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein. 33 1.5
BC024157-1|AAH24157.1| 779|Homo sapiens pleckstrin homology dom... 32 3.5
AY007233-1|AAG01896.1| 779|Homo sapiens phosphoinositol 3-phosp... 32 3.5
AB208908-1|BAD92145.1| 382|Homo sapiens Pleckstrin homology dom... 32 3.5
X76132-1|CAA53735.1| 1447|Homo sapiens tumour suppressor protein. 31 6.1
D88213-1|BAA19001.1| 729|Homo sapiens retina-specific amine oxi... 31 8.0
DQ060035-1|AAY43129.1| 756|Homo sapiens amine oxidase, copper c... 31 8.0
BC142641-1|AAI42642.1| 756|Homo sapiens amine oxidase, copper c... 31 8.0
AF081363-1|AAD39345.1| 756|Homo sapiens retina copper-containin... 31 8.0
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 8.0
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 8.0
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 8.0
AB012943-2|BAA32590.1| 756|Homo sapiens retina-specific amine o... 31 8.0
AB012943-1|BAA32589.1| 729|Homo sapiens retina-specific amine o... 31 8.0
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 8.0
>AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens
cDNA FLJ45322 fis, clone BRHIP3006294, moderately
similar to Mus musculus Cdc42 GTPase-activating protein
(Cdgap). ).
Length = 1007
Score = 33.1 bits (72), Expect = 1.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 84 LHIADRMSQIAEEQKLEESDGLPPASSS 167
L +A+R Q+AE+Q +E G PPAS S
Sbjct: 766 LALAERAQQVAEQQSQQECGGTPPASQS 793
>AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein.
Length = 903
Score = 33.1 bits (72), Expect = 1.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 84 LHIADRMSQIAEEQKLEESDGLPPASSS 167
L +A+R Q+AE+Q +E G PPAS S
Sbjct: 518 LALAERAQQVAEQQSQQECGGTPPASQS 545
>BC024157-1|AAH24157.1| 779|Homo sapiens pleckstrin homology domain
containing, family A (phosphoinositide binding speci
protein.
Length = 779
Score = 31.9 bits (69), Expect = 3.5
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Frame = +3
Query: 150 PPASSSSIAAQEKPREELPTRALRP-------RSTLTRKTTNALSSQSVGSGGSAKRKTA 308
PPA S A +P L +RP R TL+R T S GG R
Sbjct: 256 PPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQRQTLSRPPTPRRGPPSEAGGGKPPRSPQ 315
Query: 309 LNKNQIPKTNVHSGGDGCLLL 371
+ +Q P+T HSG L L
Sbjct: 316 -HWSQEPRTQAHSGSPTYLQL 335
>AY007233-1|AAG01896.1| 779|Homo sapiens phosphoinositol
3-phosphate binding protein-1 protein.
Length = 779
Score = 31.9 bits (69), Expect = 3.5
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Frame = +3
Query: 150 PPASSSSIAAQEKPREELPTRALRP-------RSTLTRKTTNALSSQSVGSGGSAKRKTA 308
PPA S A +P L +RP R TL+R T S GG R
Sbjct: 256 PPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQRQTLSRPPTPRRGPPSEAGGGKPPRSPQ 315
Query: 309 LNKNQIPKTNVHSGGDGCLLL 371
+ +Q P+T HSG L L
Sbjct: 316 -HWSQEPRTQAHSGSPTYLQL 335
>AB208908-1|BAD92145.1| 382|Homo sapiens Pleckstrin homology
domain-containing protein family A member 4 variant
protein.
Length = 382
Score = 31.9 bits (69), Expect = 3.5
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Frame = +3
Query: 150 PPASSSSIAAQEKPREELPTRALRP-------RSTLTRKTTNALSSQSVGSGGSAKRKTA 308
PPA S A +P L +RP R TL+R T S GG R
Sbjct: 226 PPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQRQTLSRPPTPRRGPPSEAGGGKPPRSPQ 285
Query: 309 LNKNQIPKTNVHSGGDGCLLL 371
+ +Q P+T HSG L L
Sbjct: 286 -HWSQEPRTQAHSGSPTYLQL 305
>X76132-1|CAA53735.1| 1447|Homo sapiens tumour suppressor protein.
Length = 1447
Score = 31.1 bits (67), Expect = 6.1
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 5/119 (4%)
Frame = +3
Query: 93 ADRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQS 272
A R ++E ++ LPP+ +++E P +PT +RP L R N L
Sbjct: 1295 AGRSQSVSEGPTTQQPPMLPPSQPEHSSSEEAPSRTIPTACVRPTHPL-RSFANPLLPPP 1353
Query: 273 VGSGGSAKRKTALNKN---QIPKTNVHSGGDGCLLLERTTL--SGIPLIQDDNDQGWRP 434
+ + T L +PKT+V + G R+ L +P + +++ +P
Sbjct: 1354 MSAIEPKVPYTPLLSQPGPTLPKTHVKTASLGLAGKARSPLLPVSVPTAPEVSEESHKP 1412
>D88213-1|BAA19001.1| 729|Homo sapiens retina-specific amine
oxidase protein.
Length = 729
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 453 AHWNMHQVAILGHYHLELKEYHLEWFS 373
AHW + QV LGHY+ +L + E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277
>DQ060035-1|AAY43129.1| 756|Homo sapiens amine oxidase, copper
containing 2 (retina-specific) protein.
Length = 756
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 453 AHWNMHQVAILGHYHLELKEYHLEWFS 373
AHW + QV LGHY+ +L + E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277
>BC142641-1|AAI42642.1| 756|Homo sapiens amine oxidase, copper
containing 2 (retina-specific) protein.
Length = 756
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 453 AHWNMHQVAILGHYHLELKEYHLEWFS 373
AHW + QV LGHY+ +L + E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277
>AF081363-1|AAD39345.1| 756|Homo sapiens retina copper-containing
monoamine oxidase protein.
Length = 756
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 453 AHWNMHQVAILGHYHLELKEYHLEWFS 373
AHW + QV LGHY+ +L + E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 30.7 bits (66), Expect = 8.0
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 93 ADRMSQIAEEQKLEESDGLPPASSSSIA--AQEKPREELPTRALRPRSTLTRKTTNALSS 266
A S++ E+ S + A S S+ AQ++PR +P+ L +TT S
Sbjct: 1445 APSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGS 1504
Query: 267 QSVGSGGSA 293
QS+ SG A
Sbjct: 1505 QSLSSGAVA 1513
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.7 bits (66), Expect = 8.0
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 93 ADRMSQIAEEQKLEESDGLPPASSSSIA--AQEKPREELPTRALRPRSTLTRKTTNALSS 266
A S++ E+ S + A S S+ AQ++PR +P+ L +TT S
Sbjct: 2413 APSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGS 2472
Query: 267 QSVGSGGSA 293
QS+ SG A
Sbjct: 2473 QSLSSGAVA 2481
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein protein.
Length = 1275
Score = 30.7 bits (66), Expect = 8.0
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 93 ADRMSQIAEEQKLEESDGLPPASSSSIA--AQEKPREELPTRALRPRSTLTRKTTNALSS 266
A S++ E+ S + A S S+ AQ++PR +P+ L +TT S
Sbjct: 936 APSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGS 995
Query: 267 QSVGSGGSA 293
QS+ SG A
Sbjct: 996 QSLSSGAVA 1004
>AB012943-2|BAA32590.1| 756|Homo sapiens retina-specific amine
oxidase protein.
Length = 756
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 453 AHWNMHQVAILGHYHLELKEYHLEWFS 373
AHW + QV LGHY+ +L + E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277
>AB012943-1|BAA32589.1| 729|Homo sapiens retina-specific amine
oxidase protein.
Length = 729
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 453 AHWNMHQVAILGHYHLELKEYHLEWFS 373
AHW + QV LGHY+ +L + E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.7 bits (66), Expect = 8.0
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 93 ADRMSQIAEEQKLEESDGLPPASSSSIA--AQEKPREELPTRALRPRSTLTRKTTNALSS 266
A S++ E+ S + A S S+ AQ++PR +P+ L +TT S
Sbjct: 2461 APSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGS 2520
Query: 267 QSVGSGGSA 293
QS+ SG A
Sbjct: 2521 QSLSSGAVA 2529
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,440,018
Number of Sequences: 237096
Number of extensions: 1563297
Number of successful extensions: 4421
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4290
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12381054106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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