Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_I21
(941 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 36 0.056
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 36 0.056
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 36 0.056
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 36 0.056
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 36 0.056
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 36 0.056
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 36 0.056
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 36 0.056
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 32 0.68
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 32 0.68
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 32 0.68
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z82096-15|CAD45621.1| 397|Caenorhabditis elegans Hypothetical p... 29 6.4
Z82096-13|CAD45619.1| 381|Caenorhabditis elegans Hypothetical p... 29 6.4
Z81511-10|CAD45588.1| 397|Caenorhabditis elegans Hypothetical p... 29 6.4
Z81511-8|CAD45586.1| 381|Caenorhabditis elegans Hypothetical pr... 29 6.4
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 6.4
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF038608-2|AAU05595.1| 297|Caenorhabditis elegans Serpentine re... 29 6.4
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 29 6.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.4
AJ011936-1|CAB41353.1| 66|Caenorhabditis elegans cyclic AMP-de... 28 8.4
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 35.5 bits (78), Expect = 0.056
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 96 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 275
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 672 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 730
Query: 276 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 440
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 731 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 790
Query: 441 YSSEHSMS 464
SS S S
Sbjct: 791 PSSSSSSS 798
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 35.5 bits (78), Expect = 0.056
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 96 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 275
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 706 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 764
Query: 276 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 440
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 765 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 824
Query: 441 YSSEHSMS 464
SS S S
Sbjct: 825 PSSSSSSS 832
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 35.5 bits (78), Expect = 0.056
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 96 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 275
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 802 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 860
Query: 276 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 440
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 861 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 920
Query: 441 YSSEHSMS 464
SS S S
Sbjct: 921 PSSSSSSS 928
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 35.5 bits (78), Expect = 0.056
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 96 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 275
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 672 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 730
Query: 276 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 440
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 731 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 790
Query: 441 YSSEHSMS 464
SS S S
Sbjct: 791 PSSSSSSS 798
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 35.5 bits (78), Expect = 0.056
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 96 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 275
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 706 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 764
Query: 276 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 440
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 765 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 824
Query: 441 YSSEHSMS 464
SS S S
Sbjct: 825 PSSSSSSS 832
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 35.5 bits (78), Expect = 0.056
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 96 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 275
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 802 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 860
Query: 276 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 440
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 861 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 920
Query: 441 YSSEHSMS 464
SS S S
Sbjct: 921 PSSSSSSS 928
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 35.5 bits (78), Expect = 0.056
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 96 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 275
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 706 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 764
Query: 276 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 440
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 765 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 824
Query: 441 YSSEHSMS 464
SS S S
Sbjct: 825 PSSSSSSS 832
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 35.5 bits (78), Expect = 0.056
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 96 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 275
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 802 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 860
Query: 276 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 440
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 861 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 920
Query: 441 YSSEHSMS 464
SS S S
Sbjct: 921 PSSSSSSS 928
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
protein F09E8.3 protein.
Length = 1369
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 183 EKPREELPTRALRPRSTLTRKTTNALSSQSVGS 281
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 183 EKPREELPTRALRPRSTLTRKTTNALSSQSVGS 281
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 183 EKPREELPTRALRPRSTLTRKTTNALSSQSVGS 281
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 691 PXKXXFXPPXXKXGVXPXPPXVXFXXXXPXXPPPXGXXPXP 569
P F PP G P PP + F P PP G P P
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPM-FAGGIPPPPPMMGGIPPP 107
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 96 DRMSQIAEEQKLEESD-GLPPASSSSIAAQEKPREELP 206
+R + E + EE D G+ PA + QEKPR++ P
Sbjct: 224 EREDTVDESKGEEEEDQGVRPAQKRQVKQQEKPRKQKP 261
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 96 DRMSQIAEEQKLEESD-GLPPASSSSIAAQEKPREELP 206
+R + E + EE D G+ PA + QEKPR++ P
Sbjct: 224 EREDTVDESKGEEEEDQGVRPAQKRQVKQQEKPRKQKP 261
>Z82096-15|CAD45621.1| 397|Caenorhabditis elegans Hypothetical
protein ZK909.2j protein.
Length = 397
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 252 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 431
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 432 PDAYSS 449
A ++
Sbjct: 63 NPAQNT 68
>Z82096-13|CAD45619.1| 381|Caenorhabditis elegans Hypothetical
protein ZK909.2h protein.
Length = 381
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 252 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 431
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 432 PDAYSS 449
A ++
Sbjct: 63 NPAQNT 68
>Z81511-10|CAD45588.1| 397|Caenorhabditis elegans Hypothetical
protein ZK909.2j protein.
Length = 397
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 252 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 431
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 432 PDAYSS 449
A ++
Sbjct: 63 NPAQNT 68
>Z81511-8|CAD45586.1| 381|Caenorhabditis elegans Hypothetical
protein ZK909.2h protein.
Length = 381
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 252 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 431
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 432 PDAYSS 449
A ++
Sbjct: 63 NPAQNT 68
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +3
Query: 129 LEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKT 305
L + +PP +S+S +KP + P ST T TT + S + S T
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTT 635
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +3
Query: 129 LEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKT 305
L + +PP +S+S +KP + P ST T TT + S + S T
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTT 635
>AF038608-2|AAU05595.1| 297|Caenorhabditis elegans Serpentine
receptor, class z protein70 protein.
Length = 297
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 15 LPISLYVEFLKILSVF*QYF*ILLHIADRMSQIAEEQKLEESDGLPP 155
LPIS+YV FL + SV + +LL I + + EEQ ++ D L P
Sbjct: 16 LPISVYVSFLFLFSVLMICYVLLLPIFEYTRKANEEQ--DKKDKLYP 60
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +3
Query: 117 EEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAK 296
++++ E S +P ASS I++QE+P E T + + S ++ ++ +S+ + + K
Sbjct: 221 KKKEAEASTSVPQASSPDISSQEQP--ESSTSSSKKPSKKEKEPSDPMSTFVLDNWKKKK 278
Query: 297 RKTALNKN 320
R LN +
Sbjct: 279 RDYKLNSS 286
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = -2
Query: 691 PXKXXFXPPXXKXGVXPXPPXVXFXXXXPXXPPPXGXXPXPG 566
P F PP P PP + + P PPP PG
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 361
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = -2
Query: 691 PXKXXFXPPXXKXGVXPXPPXVXFXXXXPXXPPPXGXXPXPG 566
P F PP P PP + + P PPP PG
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 371
>AJ011936-1|CAB41353.1| 66|Caenorhabditis elegans cyclic
AMP-dependent protein kinasecatalytic subunit protein.
Length = 66
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +3
Query: 252 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 431
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 432 PDA 440
A
Sbjct: 63 NPA 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,299,478
Number of Sequences: 27780
Number of extensions: 236123
Number of successful extensions: 823
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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