Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_I19
         (974 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    33   0.017
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.64 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   6.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   7.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 32.7 bits (71), Expect = 0.017
 Identities = 19/57 (33%), Positives = 22/57 (38%)
 Frame = +3

Query: 585 QPPXXXGRGXPPNPGXXPPXXPPPXAKRXRPTGPRAPVKXXPSXXXXTXXXGPPPPP 755
           +PP   G   PP  G  PP  PP      RP    +P     S    +   GPP PP
Sbjct: 247 RPPSAQGMQRPPMMGQPPPIRPPNPMGGPRP--QISPQNSNLSGGMPSGMVGPPRPP 301



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
 Frame = +3

Query: 636 PPXXPP-PXAKRXRPTGPRAPVKXXPSXXXXTXXXGPPPPPXQ 761
           PP  P  P   R  P  PRA VK  PS    T    P  P  Q
Sbjct: 102 PPARPSQPPTTRFAPE-PRAEVKFVPSVPLKTPPVRPLLPQQQ 143


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.64
 Identities = 15/46 (32%), Positives = 15/46 (32%)
 Frame = +3

Query: 615 PPNPGXXPPXXPPPXAKRXRPTGPRAPVKXXPSXXXXTXXXGPPPP 752
           PP P   PP  PPP      P G   P    P         G  PP
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLG--GPAGSRPPLPNLLGFGGAAPP 625



 Score = 25.4 bits (53), Expect = 2.6
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +3

Query: 609 GXPPNPGXXPPXXPPPXAKRXRPTGPRA 692
           G P  P   PP  PPP      P  P A
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPPSPLA 599


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 4/60 (6%)
 Frame = -2

Query: 754 GGGGGPXXXVWXXXEGXXFTGALGPVGRXRLAXGGGSXGGXXPGFG----GXPLPXXXGG 587
           GGGGG                    V       GGG  GG  PG G    G P P   GG
Sbjct: 170 GGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 748 PPLARXXXAXPXPPRXXXGXQXPXRGPPXXPGXRPPP 858
           PP        P  P    G   P   PP   G RPPP
Sbjct: 86  PPRPGMIPGMPGAPPLLMGPNGPL--PPPMMGMRPPP 120


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 685 GPVGRXRLAXGGGSXGGXXPG 623
           GPVG   +  GGG  GG   G
Sbjct: 539 GPVGPAGVGGGGGGGGGGGGG 559


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,948
Number of Sequences: 2352
Number of extensions: 9351
Number of successful extensions: 144
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106474641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)