Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_I17
(1015 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.012
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.15
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.20
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.20
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.60
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.79
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 0.97
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 5.6
SPCC4B3.05c |hem12||uroporphyrinogen decarboxylase |Schizosaccha... 26 7.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.7
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.5 bits (78), Expect = 0.012
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPX--SXPPPPXXXXPLKSPPPXP 768
PP P+ S P P P + +P P S PPP P+KSPP P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.15
Identities = 24/83 (28%), Positives = 27/83 (32%), Gaps = 1/83 (1%)
Frame = +1
Query: 538 RXXPPXXXGGXRPSXXRXXXPPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSX 717
R PP PS R PPP + PPP P G+ S
Sbjct: 358 RSAPPPPPPRSAPSTGRQ---PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 718 PP-PPXXXXPLKSPPPXPPXXRP 783
PP P P +PP PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP 437
Score = 31.1 bits (67), Expect = 0.26
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +1
Query: 574 PSXXRXXXPPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXXPL-- 747
P R PP S PPPP LP G + PPPP P
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP-PQGRSAPPPPPPRSAPSTG 373
Query: 748 KSPPP 762
+ PPP
Sbjct: 374 RQPPP 378
Score = 30.3 bits (65), Expect = 0.45
Identities = 24/90 (26%), Positives = 26/90 (28%), Gaps = 5/90 (5%)
Frame = +1
Query: 535 PRXXPPXXXGGXRPSXXRXXXPPPPRXXXGXXXSXXP--PPPXDPXXXXNRXXLP---GD 699
PR P S + PPP + PPP P NR P G
Sbjct: 272 PRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGS 331
Query: 700 XGPXSXPPPPXXXXPLKSPPPXPPXXRP*P 789
PPPP P PP R P
Sbjct: 332 SNSSLPPPPPPPRSNAAGSIPLPPQGRSAP 361
Score = 29.9 bits (64), Expect = 0.60
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 615 PPXGGGGRXXXXXGPXPPPPXGGXXXRAPXVXXRXPAPXPXPP 487
PP G G P PPPP P AP P PP
Sbjct: 325 PPIGNGSSNSSLP-PPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +1
Query: 649 PPXDPXXXXNRXX--LPGDXGPXSXPPPPXXXXPLKSPPPXPP 771
PP P +R +P P P PP + SPP PP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 26.2 bits (55), Expect = 7.4
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Frame = -2
Query: 624 PXXPPXGGGGRXXXXXGPXPPP-PXGGXXXRAPXVXXRXPAPXP-XPPXPXXLPL 466
P PP G R P PP P P P P PP P P+
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI 455
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.20
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +1
Query: 562 GGXRPSXXRXXXPPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXX 741
GG P+ P P+ S PPP P GP S PPPP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP---L 1735
Query: 742 PLKSPPPXP 768
P S P P
Sbjct: 1736 PASSAPSVP 1744
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 706 PXSXPPPPXXXXPLKSPPPXPPXXRP 783
P S PPPP PP PP P
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +1
Query: 643 PPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXXPLKSPPPXP--PXXRP*P 789
P P + P + PPPP P S PP P P P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.20
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 691 PGDXGPXSXPPPPXXXXPLKSPPPXPP 771
PG+ P PPPP P + PPP PP
Sbjct: 6 PGN--PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNR 681
PPPP G PPPP P R
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKR 36
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.9 bits (64), Expect = 0.60
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXXPLKSPPPXPP 771
PPPP + P P P P GP PPPP PPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPA--------PIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 576 GPXPPPPXGGXXXRAPXVXXRXPAPXPXPP 487
GP PPPP G P P P P PP
Sbjct: 760 GPPPPPPPPGVAGAGP------PPPPPPPP 783
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -1
Query: 568 PPPXXGGXXXEGPXCPXAXPXPXXGSPXXXXPPPXXFXSVFXPPXP 431
PPP P P P G P PPP + PP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPP 726
PPPP G PPPP +R P P + P P
Sbjct: 764 PPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP---APQAEPEP 803
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.79
Identities = 17/62 (27%), Positives = 21/62 (33%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXXPLKSPPPXPPXX 777
PPPP PP +P + + G PPPP P + PP P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEH-MPPPPMHHEPGEHMPPPPMHH 266
Query: 778 RP 783
P
Sbjct: 267 EP 268
Score = 29.5 bits (63), Expect = 0.79
Identities = 17/62 (27%), Positives = 21/62 (33%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXXPLKSPPPXPPXX 777
PPPP PP +P + + G PPPP P + PP P
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEH-MPPPPMHHEPGEHMPPPPMHH 279
Query: 778 RP 783
P
Sbjct: 280 EP 281
Score = 29.5 bits (63), Expect = 0.79
Identities = 17/62 (27%), Positives = 21/62 (33%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXXPLKSPPPXPPXX 777
PPPP PP +P + + G PPPP P + PP P
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEH-MPPPPMHHEPGEHMPPPPMHH 292
Query: 778 RP 783
P
Sbjct: 293 EP 294
Score = 29.5 bits (63), Expect = 0.79
Identities = 17/62 (27%), Positives = 21/62 (33%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXXPLKSPPPXPPXX 777
PPPP PP +P + + G PPPP P + PP P
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEH-MPPPPMHHEPGEHMPPPPMHH 305
Query: 778 RP 783
P
Sbjct: 306 EP 307
Score = 29.5 bits (63), Expect = 0.79
Identities = 17/62 (27%), Positives = 21/62 (33%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXXPLKSPPPXPPXX 777
PPPP PP +P + + G PPPP P + PP P
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEH-MPPPPMHHEPGEHMPPPPMHH 318
Query: 778 RP 783
P
Sbjct: 319 EP 320
Score = 29.5 bits (63), Expect = 0.79
Identities = 17/62 (27%), Positives = 21/62 (33%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXXPLKSPPPXPPXX 777
PPPP PP +P + + G PPPP P + PP P
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEH-MPPPPMHHEPGEHMPPPPMHH 331
Query: 778 RP 783
P
Sbjct: 332 EP 333
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXS-XPPPPXXXXPLKSPPPXP 768
PPPP PPPP + P P PPPP P + PP P
Sbjct: 286 PPPPMHHE--PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 27.1 bits (57), Expect(2) = 0.97
Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +1
Query: 565 GXRPSXXRXXXPPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXP-PPPXXXX 741
G RPS PPP PPP ++ S P P
Sbjct: 127 GSRPSVLNQEQVPPPPVRPNVMSQMPPPPSYSSSGSYSQTYQSNANYTASSPLPTASANA 186
Query: 742 PLKSPPP 762
PL PPP
Sbjct: 187 PLPVPPP 193
Score = 20.6 bits (41), Expect(2) = 0.97
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 748 KSPPPXPPXXR 780
K PPP PP R
Sbjct: 221 KPPPPAPPKPR 231
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +3
Query: 417 GXPPPGXGGXKTDXKXXGGGXXXXGXPXXGXGXAXGQXGPS--XXXPPXXGGG 569
G PPPG GG G G G G G + GP P GGG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 5.6
Identities = 19/86 (22%), Positives = 24/86 (27%), Gaps = 3/86 (3%)
Frame = +1
Query: 535 PRXXPPXXXGGXRPSXXRXXXPPPPRXXXGXXXSXXPPP---PXDPXXXXNRXXLPGDXG 705
P PP P + PP P P P P +P G
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 706 PXSXPPPPXXXXPLKSPPPXPPXXRP 783
P P P+ +P PP +P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 691 PGDXGPXSXPPPPXXXXPLKSPPPXPPXXRP 783
P P S PPP L SP PP P
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHP 991
Score = 25.8 bits (54), Expect = 9.7
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +1
Query: 598 PPPPRXXXGXXXSXXPPPPXDPXXXXNRXXLPGDXGPXSXPPPPXXXXPLKSPPPXPPXX 777
PP P+ G PPP P +P P + PP P L P P P
Sbjct: 1179 PPVPKPAAGVPP--VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL-PPVPVPTAK 1235
Query: 778 RP 783
P
Sbjct: 1236 AP 1237
>SPCC4B3.05c |hem12||uroporphyrinogen decarboxylase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 986 DLWLXAARGDEAXXPPXW 933
DL L AA+G+E PP W
Sbjct: 4 DLILRAAKGEEVERPPVW 21
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Frame = +1
Query: 643 PPPPXDPXXXXN-RXXLPGDXGPXSXPPPP 729
PPP P LP D P PPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,857,421
Number of Sequences: 5004
Number of extensions: 24276
Number of successful extensions: 178
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 527257104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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