Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_I15
         (1038 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0515 + 10121849-10122149,10132151-10132187,10132314-101327...    29   4.6  
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   6.1  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    29   6.1  
01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,787...    29   6.1  
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248...    29   8.0  
04_04_1414 - 33394518-33394847                                         29   8.0  

>09_02_0515 +
           10121849-10122149,10132151-10132187,10132314-10132790,
           10133184-10133733
          Length = 454

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 305 PPXPXGXXXXGGXFPXXGHXGLG-GXXGF 222
           PP P G    GG +P  G+ G+G G  GF
Sbjct: 120 PPMPLGEYCAGGLWPSYGNVGMGTGEYGF 148


>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +1

Query: 697 PGIPXXPTXGARPX-PXXXPPAPGKTPRHHXRXXRXXRXP 813
           PG P  P    +P  P   PP PG  PR+     +  R P
Sbjct: 621 PGAPPPPPPPGKPGGPPPPPPRPGSLPRNLAGGDKVHRAP 660


>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
            257038-257169,257297-258589,259133-259837,260465-260549,
            260604-260650,260810-260900,261838-262101,262195-262309,
            262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +1

Query: 697  PGIPXXPTXGARPX-PXXXPPAPGKTPRHHXRXXRXXRXP 813
            PG P  P    +P  P   PP PG  PR+     +  R P
Sbjct: 926  PGAPPPPPPPGKPGGPPPPPPPPGSLPRNLAGGDKVHRAP 965


>01_01_0995 +
           7875273-7875495,7876196-7876274,7876422-7876536,
           7878507-7878761
          Length = 223

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 25/84 (29%), Positives = 29/84 (34%)
 Frame = -1

Query: 486 GXGXXQXXALWXGXAGLPXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPX 307
           G G  +  A   G  G   G GG     + P  +  P  PRP V G P P   P   G  
Sbjct: 4   GGGDEREKAKGGGGGGGGGGGGGEYGTFQGPP-SYPP--PRPPVVGYPQPAPPPGLYGQG 60

Query: 306 PPXXRGXXXXGGXFSXXGAXGAXG 235
            P  R      G  +     GA G
Sbjct: 61  DPYYRPRGGYQGIPARDYEAGARG 84


>05_04_0173 +
           18724367-18724476,18724570-18724651,18724750-18724840,
           18725060-18725172,18725270-18725342,18725445-18725565,
           18725665-18725782,18726609-18726748,18726824-18726881,
           18727007-18727077,18727181-18727733
          Length = 509

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
 Frame = +2

Query: 245 PNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGXGQPXTKGRGKXGT--XAXXGXLGAXXX 418
           P+AP           PR  GG      G   G G P   G+G  G+   A     G    
Sbjct: 388 PHAPMAAGPGHHYAKPRGPGGSSRYPQGGNQGGGYPNRGGQGGGGSYGNAPYPQQGRGPP 447

Query: 419 PPXPXGNPA 445
           PP P    A
Sbjct: 448 PPYPGSGMA 456


>04_04_1414 - 33394518-33394847
          Length = 109

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
 Frame = -2

Query: 542 GXGPVVXDRGLRPPXXXXGXGGXGXGXRCGG-GXXGC 435
           G G V        P    G GG G G  CGG G  GC
Sbjct: 73  GVGAVCGGSACGGPACGGGGGGGGGGGGCGGGGGGGC 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,453,309
Number of Sequences: 37544
Number of extensions: 217737
Number of successful extensions: 1473
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3059425352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)