Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_I15
(1038 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 39 0.005
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.58
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.58
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 32 0.58
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.58
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.58
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 32 0.77
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 32 0.77
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.8
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.4
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 30 2.4
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 2.4
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.4
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 30 2.4
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 3.1
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 30 3.1
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 3.1
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 3.1
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 3.1
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 3.1
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 30 3.1
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 30 3.1
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 3.1
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 29 4.1
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 4.1
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 4.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.1
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 7.2
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 7.2
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 7.2
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 7.2
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 29 7.2
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 29 7.2
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 29 7.2
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 7.2
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 7.2
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.5
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 9.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 9.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 9.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 9.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 9.5
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 39.1 bits (87), Expect = 0.005
Identities = 26/77 (33%), Positives = 28/77 (36%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGXGQPXTKGRGKXGTXAXXGXLGA 409
G P AP A + PP P G P Q G G P G+ G G G
Sbjct: 155 GQPGAP-AQSGGRGPPGPRGPAGDAG-SPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPG- 211
Query: 410 XXXPPXPXGNPAHPXHS 460
PP P G P P HS
Sbjct: 212 ---PPGPAGGPGQPGHS 225
Score = 32.3 bits (70), Expect = 0.58
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +2
Query: 311 GPXQXGAXXGXGQPXTKGRGKXGTXAXXGXLGAXXXPPXPXGNPAHPXHSAXXCXXP 481
GP Q G G G P +G G G G P P GNP P A C P
Sbjct: 218 GPGQPGHSGGAGSPGP--QGPPGPSGQPGHSGNDGVPGAP-GNPGSPGGDAAYCPCP 271
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.25
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 542 GXGPVVXDRGLRPPXXXXGXGGXGXGXRCGGGXXGCPXG 426
G G G PP G G G G CGGG GC G
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGG 100
Score = 33.1 bits (72), Expect = 0.33
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G GG G G CGGG GC G G
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGG 116
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G G G G CGGG GC G G
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGG 123
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G G G G CGGG GC G G
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGG 130
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G G G G CGGG GC G G
Sbjct: 114 GGGCGGGGGGCGGGGGGCGGGGGG 137
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G GG G G GGG GC G +G
Sbjct: 154 GCGGGGGGGCGGGGGGGCGGGSSG 177
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.25
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 542 GXGPVVXDRGLRPPXXXXGXGGXGXGXRCGGGXXGCPXG 426
G G G PP G G G G CGGG GC G
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGG 100
Score = 33.1 bits (72), Expect = 0.33
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G GG G G CGGG GC G G
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGG 116
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G G G G CGGG GC G G
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGG 123
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G G G G CGGG GC G G
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGG 130
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G G G G CGGG GC G G
Sbjct: 114 GGGCGGGGGGCGGGGGGCGGGGGG 137
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G GG G G GGG GC G +G
Sbjct: 154 GCGGGGGGGCGGGGGGGCGGGSSG 177
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.33
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G GG G G CGGG GC G G
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGG 98
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 506 PPXXXXGXGGXGXGXRCGGGXXGCPXG 426
PP G G G G CGGG GC G
Sbjct: 56 PPPPACGGGCGGGGGGCGGGGGGCGGG 82
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G GG G G CGGG GC G G
Sbjct: 140 GCGGGGGGG-CGGGGGGCGGGGGG 162
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G G G G CGGG GC G G
Sbjct: 146 GGGCGGGGGGCGGGGGGCGGGGGG 169
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAG 417
G G G G CGGG GC G G
Sbjct: 153 GGGCGGGGGGCGGGGGGCGGGGGG 176
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 506 PPXXXXGXGGXGXGXRCGGGXXGCPXGXAG 417
PP G G G G CGGG G G G
Sbjct: 113 PPPPACGGGCGGGGGGCGGGCGGGGGGGCG 142
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXG-CPXGXAG 417
G GG G G CGGG G C G G
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGG 147
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.58
Identities = 25/75 (33%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGX-GQPXTKGRGKXGTXAXXGXLG 406
G P AP P E P G GP G G P T G G G G G
Sbjct: 198 GAPGAPGGPG-EPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Query: 407 AXXXPPXPXGNPAHP 451
A P GNP P
Sbjct: 257 A----PGADGNPGGP 267
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 32.3 bits (70), Expect = 0.58
Identities = 25/75 (33%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGX-GQPXTKGRGKXGTXAXXGXLG 406
G P AP P E P G GP G G P T G G G G G
Sbjct: 198 GAPGAPGGPG-EPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Query: 407 AXXXPPXPXGNPAHP 451
A P GNP P
Sbjct: 257 A----PGADGNPGGP 267
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.58
Identities = 25/94 (26%), Positives = 26/94 (27%)
Frame = -2
Query: 506 PPXXXXGXGGXGXGXRCGGGXXGCPXGXAGXRXPLGXPXLPXXRFSXXPXXXVXPXXXXP 327
PP G G G P G AG + P G P P P P P
Sbjct: 160 PPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSP-----GAPGEPGRPGDDAP 214
Query: 326 LXGWXPXPPXPXGXXXXGGXFPXXGHXGLGGXXG 225
P P P G G G G G G
Sbjct: 215 SEPLIPGEPGPQGPPGPPGQAGPDGQPGAPGGPG 248
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 32.3 bits (70), Expect = 0.58
Identities = 25/75 (33%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGX-GQPXTKGRGKXGTXAXXGXLG 406
G P AP P E P G GP G G P T G G G G G
Sbjct: 198 GAPGAPGGPG-EPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Query: 407 AXXXPPXPXGNPAHP 451
A P GNP P
Sbjct: 257 A----PGADGNPGGP 267
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.58
Identities = 25/75 (33%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGX-GQPXTKGRGKXGTXAXXGXLG 406
G P AP P E P G GP G G P T G G G G G
Sbjct: 198 GAPGAPGGPG-EPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Query: 407 AXXXPPXPXGNPAHP 451
A P GNP P
Sbjct: 257 A----PGADGNPGGP 267
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 31.9 bits (69), Expect = 0.77
Identities = 25/82 (30%), Positives = 28/82 (34%), Gaps = 6/82 (7%)
Frame = +2
Query: 224 TXGXPXAPNAPXXEKXPP----XXXXPRXXGGXGPXQXGAXXGXGQPXTKGRGKXGTXAX 391
T G P AP AP PP P P GA G+P ++ G G
Sbjct: 117 TPGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSE--GPPGPPGH 174
Query: 392 XGXLGAXXXP--PXPXGNPAHP 451
G G P P P G HP
Sbjct: 175 DGPNGGPGQPGQPGPHGPNGHP 196
Score = 28.3 bits (60), Expect = 9.5
Identities = 22/87 (25%), Positives = 24/87 (27%)
Frame = +1
Query: 175 PXPPQKXXKKXXKXKXNPXXPPSPXCPXXGKXPPXXXXPXGXGGXGXXPXRGXXXXGXTX 354
P PP P PP P G P P G G P G
Sbjct: 151 PGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNGHPGKP----GSQGPPG 206
Query: 355 XXGXXEXRXXGKXGXPRGXLXPAXPXG 435
G + G+ G P G P P G
Sbjct: 207 PPGHSDEPKPGQPGQP-GRAGPRGPRG 232
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.77
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 PXXEKXPPXXXXPRXXGGXG-PXQXGAXXGXGQPXTKGRGKXGTXAXXGXLGAXXXPPXP 430
P + P P G G P GA G P T G GT G G P P
Sbjct: 152 PGPKGPPGQPGAPGEQGPNGRPGAPGAPGPQGPPGTAGND--GTPGQPGAPGQVRTVPAP 209
Query: 431 XGNPAHP 451
GNP P
Sbjct: 210 PGNPGQP 216
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 458 CGGGXXGCPXGXAGXRXPLGXPXLP 384
CG GCP G G R P G P LP
Sbjct: 93 CGLQSQGCPDGPPGARGPQGAPGLP 117
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/92 (27%), Positives = 26/92 (28%), Gaps = 1/92 (1%)
Frame = +3
Query: 231 GPPXPXMPPXXKXPPXXXXPXGXXGX-GXPXXXGXXXGXXNPXXRXXGKXXXWQXXXX*G 407
G P PP PP P G G G P G P G G
Sbjct: 179 GSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPA---------G 229
Query: 408 XPXTRXXPGATXXTPXTAPSXAXSPXPXXXXG 503
P PG +P AP A P P G
Sbjct: 230 PPGPAGPPGPDGASPTAAPGAAGPPGPPGPAG 261
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/66 (27%), Positives = 21/66 (31%)
Frame = +2
Query: 251 APXXEKXPPXXXXPRXXGGXGPXQXGAXXGXGQPXTKGRGKXGTXAXXGXLGAXXXPPXP 430
AP + PP P P G G G P G G G+ PP P
Sbjct: 379 APPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
Query: 431 XGNPAH 448
G A+
Sbjct: 439 GGPGAY 444
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 8/79 (10%)
Frame = -2
Query: 482 GGXGXGXRCGGGXXGCPXGXAGXRXPLGXPXLPXX--------RFSXXPXXXVXPXXXXP 327
GG G G +C P G G G P P + P V P P
Sbjct: 92 GGGGGGGQCSTCCRPGPPGAGGTPGKPGRPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKP 151
Query: 326 LXGWXPXPPXPXGXXXXGG 270
G P PP P G G
Sbjct: 152 CPGGRPGPPGPPGRPGSDG 170
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 30.3 bits (65), Expect = 2.4
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGXGQPXTKGRGKXGTXAXXGXLGA 409
G P A P + P P GG G G P + G G G G
Sbjct: 142 GPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPPGEA-GPDGEGGRPGQAGQ 200
Query: 410 XXXPPXPXGNPAHP 451
P P G P P
Sbjct: 201 TRSAPSPPGQPGQP 214
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 30.3 bits (65), Expect = 2.4
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGXGQPXTKGRGKXGTXAXXGXLGA 409
G P A P + P P GG G G P + G G G G
Sbjct: 142 GPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPPGEA-GPDGEGGRPGQAGQ 200
Query: 410 XXXPPXPXGNPAHP 451
P P G P P
Sbjct: 201 TRSAPSPPGQPGQP 214
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 2.4
Identities = 28/101 (27%), Positives = 30/101 (29%), Gaps = 16/101 (15%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGC-------PXGXAGXRXPLGXPXLP--------XXRFSXXPXX 354
G GG G G GG GC P G G G P P + + P
Sbjct: 96 GGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCE 155
Query: 353 XVXPXXXXPLXGWXPXPPXPXG-XXXXGGXFPXXGHXGLGG 234
P P P PP P G GG P G G
Sbjct: 156 PSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSG 196
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Frame = -1
Query: 435 PXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGP-XPPXXRGXXXXGGXFSX 259
P G G AP P VP P + G P P P GP PP G G
Sbjct: 188 PPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGP---PGEAGPQGPPGSPGQPGADGSPGQ 244
Query: 258 XGAXGAXG 235
G G G
Sbjct: 245 PGPKGPNG 252
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 30.3 bits (65), Expect = 2.4
Identities = 26/104 (25%), Positives = 27/104 (25%), Gaps = 1/104 (0%)
Frame = +3
Query: 234 PPXPXMPPXXKXPPXXXXPXGXXGXGXPXXXGXXXGXXNPXXRXXGKXXXWQXXXX*GXP 413
PP P PP PP P G G G P G G P
Sbjct: 163 PPGPAGPPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGP----PGPPGTSGNPGTDGAP 218
Query: 414 XTRXXPGATXXTPXT-APSXAXSPXPXXXXGGAEAXVXHDRPXP 542
PG TP T P+ A P G P P
Sbjct: 219 GNPGAPGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGASEPGP 262
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/87 (25%), Positives = 25/87 (28%)
Frame = +1
Query: 181 PPQKXXKKXXKXKXNPXXPPSPXCPXXGKXPPXXXXPXGXGGXGXXPXRGXXXXGXTXXX 360
PP P PP P P P P G G G P G
Sbjct: 144 PPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPA-GPPGENGNN 202
Query: 361 GXXEXRXXGKXGXPRGXLXPAXPXGQP 441
G + G+ G P G P G+P
Sbjct: 203 GEPQPGAPGEPGQP-GQPGQRGPAGEP 228
Score = 29.1 bits (62), Expect = 5.4
Identities = 22/81 (27%), Positives = 24/81 (29%), Gaps = 7/81 (8%)
Frame = -1
Query: 450 GXAGLPXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXG-------PXPPXXR 292
G G P G P+ P P +P G P P P G P PP
Sbjct: 110 GKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPE 169
Query: 291 GXXXXGGXFSXXGAXGAXGXP 229
G G G G G P
Sbjct: 170 GPNGEPGNKGPAGPPGPGGKP 190
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Frame = -1
Query: 435 PXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGP-XPPXXRGXXXXGGXFSX 259
P G G AP P VP P + G P P P GP PP G G
Sbjct: 188 PPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGP---PGEAGPQGPPGSPGQPGADGSPGQ 244
Query: 258 XGAXGAXG 235
G G G
Sbjct: 245 PGPKGPNG 252
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 225 PXGPPXPXMPPXXKXPPXXXXPXGXXGXGXPXXXGXXXGXXNP 353
P GPP P P PP P G G P G P
Sbjct: 228 PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGP 270
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = -1
Query: 435 PXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPX-PXXAPXWXGPXPPXXRGXXXXGGXFSX 259
P G G AP P P G P P + P PP G G
Sbjct: 190 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGP 249
Query: 258 XGAXGAXGXPWV 223
GA G G P V
Sbjct: 250 KGAPGPDGPPGV 261
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/74 (27%), Positives = 23/74 (31%)
Frame = -1
Query: 450 GXAGLPXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPXPPXXRGXXXXGG 271
G G P G P P P +P G P P P P P G G
Sbjct: 120 GRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPP--GAPGDPGEAGTPGRPG 177
Query: 270 XFSXXGAXGAXGXP 229
+ G+ G G P
Sbjct: 178 TDAAPGSPGPRGPP 191
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.9 bits (64), Expect = 3.1
Identities = 22/81 (27%), Positives = 24/81 (29%), Gaps = 7/81 (8%)
Frame = -1
Query: 450 GXAGLPXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXG-------PXPPXXR 292
G G P G P+ P P +P G P P P G P PP
Sbjct: 108 GKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPE 167
Query: 291 GXXXXGGXFSXXGAXGAXGXP 229
G G G G G P
Sbjct: 168 GPNGTAGNKGPAGPPGPGGKP 188
Score = 29.1 bits (62), Expect = 5.4
Identities = 22/87 (25%), Positives = 25/87 (28%)
Frame = +1
Query: 181 PPQKXXKKXXKXKXNPXXPPSPXCPXXGKXPPXXXXPXGXGGXGXXPXRGXXXXGXTXXX 360
PP + P PP P P P G G G P G
Sbjct: 142 PPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPA-GPPGENGRN 200
Query: 361 GXXEXRXXGKXGXPRGXLXPAXPXGQP 441
G + G+ G P G P GQP
Sbjct: 201 GEPQPGSPGEPGRP-GQPGSRGPAGQP 226
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.9 bits (64), Expect = 3.1
Identities = 22/80 (27%), Positives = 28/80 (35%), Gaps = 8/80 (10%)
Frame = +2
Query: 236 PXAPNAPXXEKXPPXXXX----PRXXGGXGPXQXGAXXGXGQPXTKGR----GKXGTXAX 391
P P P + P P G G G G+P +G G+ G+ +
Sbjct: 168 PPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQGPPGAPGQPGSGST 227
Query: 392 XGXLGAXXXPPXPXGNPAHP 451
G G PP P G P HP
Sbjct: 228 PGPAGPPG-PPGPNGQPGHP 246
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 225 PXGPPXPXMPPXXKXPPXXXXPXGXXGXGXPXXXGXXXGXXNP 353
P GPP P P PP P G G P G P
Sbjct: 223 PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGP 265
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = -1
Query: 435 PXGXGGXXXAPRXPXFAXVPXFPRPXVXGXP-XPXXAPXWXGPXPPXXRGXXXXGGXFSX 259
P G G AP P P G P P + P PP G G
Sbjct: 185 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGP 244
Query: 258 XGAXGAXGXP 229
GA G G P
Sbjct: 245 KGAPGPDGPP 254
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/74 (27%), Positives = 23/74 (31%)
Frame = -1
Query: 450 GXAGLPXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPXPPXXRGXXXXGG 271
G G P G P P P +P G P P P P P G G
Sbjct: 115 GRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPP--GAPGDPGEAGTPGRPG 172
Query: 270 XFSXXGAXGAXGXP 229
+ G+ G G P
Sbjct: 173 TDAAPGSPGPRGPP 186
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 225 PXGPPXPXMPPXXKXPPXXXXPXGXXGXGXPXXXGXXXGXXNP 353
P GPP P P PP P G G P G P
Sbjct: 230 PAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGP 272
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 225 PXGPPXPXMPPXXKXPPXXXXPXGXXGXGXPXXXGXXXGXXNP 353
P GPP P P PP P G G P G P
Sbjct: 223 PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGP 265
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = -1
Query: 435 PXGXGGXXXAPRXPXFAXVPXFPRPXVXGXP-XPXXAPXWXGPXPPXXRGXXXXGGXFSX 259
P G G AP P P G P P + P PP G G
Sbjct: 185 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGP 244
Query: 258 XGAXGAXGXP 229
GA G G P
Sbjct: 245 KGAPGPDGPP 254
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/74 (27%), Positives = 23/74 (31%)
Frame = -1
Query: 450 GXAGLPXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPXPPXXRGXXXXGG 271
G G P G P P P +P G P P P P P G G
Sbjct: 115 GRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPP--GAPGDPGEAGTPGRPG 172
Query: 270 XFSXXGAXGAXGXP 229
+ G+ G G P
Sbjct: 173 TDAAPGSPGPRGPP 186
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 29.9 bits (64), Expect = 3.1
Identities = 25/94 (26%), Positives = 27/94 (28%), Gaps = 8/94 (8%)
Frame = -2
Query: 482 GGXGXGXRCGGGXXGCPXGXAGXRXPLGXPXLP--------XXRFSXXPXXXVXPXXXXP 327
GG G G C G P G +G G P P R P + P P
Sbjct: 98 GGSGGGGSCSGCCLPGPAGPSGAPGKPGRPGRPGAGGLPGNPGRPPAQPCHPITPPPCRP 157
Query: 326 LXGWXPXPPXPXGXXXXGGXFPXXGHXGLGGXXG 225
P P G G GH G G G
Sbjct: 158 CPQGPPGAPGSPGPQGNAGAPGQPGHGGGSGAPG 191
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 458 CGGGXXGCPXGXAGXRXPLGXPXL 387
CG GCP G G R P G P L
Sbjct: 85 CGAKSKGCPAGPPGPRGPNGAPGL 108
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 225 PXGPPXPXMPPXXKXPPXXXXPXGXXGXGXPXXXGXXXGXXNP 353
P GPP P P PP P G G P G P
Sbjct: 230 PAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGP 272
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.5 bits (63), Expect = 4.1
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = -1
Query: 435 PXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXG-PXPPXXRGXXXXGGXFSX 259
P G G AP P P P V G P P G P PP G G
Sbjct: 181 PPGPPGQAGAPGEPGS---PAKSEPAVPGPPGPPGQAGQQGPPGPPGSNGIDGAPGAPGA 237
Query: 258 XGAXGAXGXP 229
G G G P
Sbjct: 238 KGEPGTPGEP 247
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/75 (26%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = -1
Query: 450 GXAGLPXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGP-XPPXXRGXXXXG 274
G G P G P+ P P +P G P P P G PP +G
Sbjct: 108 GKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGPKGPD 167
Query: 273 GXFSXXGAXGAXGXP 229
G G G P
Sbjct: 168 AAPGEPGPKGPIGPP 182
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = -2
Query: 449 GXXGCPXGXAGXRXPLGXPXLPXX--RFSXXPXXXVXPXXXXPLXGWXPXPPXPXGXXXX 276
G G P G G G P LP R P + P P P PP P G
Sbjct: 106 GPAGTP-GKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGD 164
Query: 275 GGXFPXXGHXGLGGXXG 225
G G G G G
Sbjct: 165 AGSNGNPGSPGQDGQPG 181
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -1
Query: 435 PXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPXPPXXRGXXXXGGXFSXX 256
P G G AP P P G P P AP G PP G G
Sbjct: 188 PSGQNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGAPGPQG--PPGQPGQPGHDGQPGAP 245
Query: 255 GAXGAXGXP 229
G G G P
Sbjct: 246 GPKGPNGNP 254
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = -2
Query: 449 GXXGCPXGXAGXRXPLGXPXLPXX--RFSXXPXXXVXPXXXXPLXGWXPXPPXPXGXXXX 276
G G P G G G P LP R P + P P P PP P G
Sbjct: 106 GPAGTP-GKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGD 164
Query: 275 GGXFPXXGHXGLGGXXG 225
G G G G G
Sbjct: 165 AGGNGNPGSPGQDGQPG 181
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 29.5 bits (63), Expect = 4.1
Identities = 22/80 (27%), Positives = 25/80 (31%), Gaps = 6/80 (7%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGXGQPXTKGR----GKXGTXAXXG 397
G P P P P G G Q G G P G+ G+ G G
Sbjct: 179 GLPGPPGDAGAPGAPGQDGAPGHPGADGQRQRGQPGPPGPPGRPGKVGINGEPGQKGIDG 238
Query: 398 XLGAXXXP--PXPXGNPAHP 451
G+ P P P G P P
Sbjct: 239 ENGSEGIPGVPGPRGAPGQP 258
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 225 PXGPPXPXMPPXXKXPPXXXXPXGXXGXGXP 317
P GPP P PP + PP G G P
Sbjct: 223 PPGPPGPPGPPGPQGPPGPPGKDGQPGKAGP 253
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 29.5 bits (63), Expect = 4.1
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXG-PXQXGAXXGXGQPXTKGRGKXGTXAXXGXLG 406
G AP AP P G G Q G+ G P G+ G G
Sbjct: 223 GPSGAPGAPGQSGGSALPGPPGPAGSPGRSGQPGSNGNVGAPGAPGQ-VVDVPGAPGPAG 281
Query: 407 AXXXPPXPXGNPAHP 451
PP P G P HP
Sbjct: 282 PPG-PPGPSGAPGHP 295
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXGCPXGXAGXRXPLGXPXLP 384
G GG G G C GCP G G G P
Sbjct: 117 GGGGGGGGCHCAAQASGCPAGPPGPPGEAGTDGEP 151
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGXGQPXTKGR-GKXGTXAXXGXLG 406
G P AP AP PP P G G P G G+ G G G
Sbjct: 118 GRPGAPGAPGFPGRPPAVCEEITEPPCTPCPPGEPGPPGPPGDAGNPGQSGHPGRNGNDG 177
Query: 407 --AXXXPPXPXGN 439
PP P GN
Sbjct: 178 GVGPQGPPGPPGN 190
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 512 LRPPXXXXGXGGXGXGXRCGGGXXGCPXG 426
++P G GG G G CGGG GC G
Sbjct: 78 VQPVYVQSGGGGCGGGG-CGGGGGGCGGG 105
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -2
Query: 488 GXGGXGXGXRCGGGXXG-CPXGXAG 417
G GG G G CGGG G C G G
Sbjct: 98 GGGGCGGGGGCGGGGGGGCGGGGGG 122
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -1
Query: 450 GXAGLPX--GXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPXPPXXRGXXXX 277
G G P G GG P P +P P P P P P P P +G
Sbjct: 688 GQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGL--PGLPGTKGEGGY 745
Query: 276 GGXFSXXGAXGAXGXP 229
G G G G P
Sbjct: 746 PGRPGEVGQPGFPGLP 761
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -1
Query: 450 GXAGLPX--GXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPXPPXXRGXXXX 277
G G P G GG P P +P P P P P P P P +G
Sbjct: 687 GQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGL--PGLPGTKGEGGY 744
Query: 276 GGXFSXXGAXGAXGXP 229
G G G G P
Sbjct: 745 PGRPGEVGQPGFPGLP 760
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -1
Query: 450 GXAGLPX--GXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPXPPXXRGXXXX 277
G G P G GG P P +P P P P P P P P +G
Sbjct: 687 GQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGL--PGLPGTKGEGGY 744
Query: 276 GGXFSXXGAXGAXGXP 229
G G G G P
Sbjct: 745 PGRPGEVGQPGFPGLP 760
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -1
Query: 450 GXAGLPX--GXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPXPPXXRGXXXX 277
G G P G GG P P +P P P P P P P P +G
Sbjct: 688 GQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGL--PGLPGTKGEGGY 745
Query: 276 GGXFSXXGAXGAXGXP 229
G G G G P
Sbjct: 746 PGRPGEVGQPGFPGLP 761
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGXGQPXTKG-RGKXGTXAXXGXLG 406
G P AP + P P G G GA G G P G G G G G
Sbjct: 183 GQPGAPGDNGQDGAPGQDGQPGAPGQDGQRGSGAPGGPGAPGNAGPAGPAGQDGAPGQDG 242
Query: 407 AXXXPPXPXGNPAHPXHS 460
P P G P ++
Sbjct: 243 -QPGPAGPAGQDGAPGNA 259
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 28.7 bits (61), Expect = 7.2
Identities = 24/81 (29%), Positives = 26/81 (32%), Gaps = 4/81 (4%)
Frame = +2
Query: 230 GXPXAPNAPXXE---KXPPXXXXPRXXGGXGPXQXGAXXGXGQPXTKG-RGKXGTXAXXG 397
G P AP AP P P G G GA G P G G G G
Sbjct: 180 GFPGAPGAPGDNGQPGTPGQDGFPGQPGADGQRGSGAPGAPGAPGNAGPAGPAGQDGFPG 239
Query: 398 XLGAXXXPPXPXGNPAHPXHS 460
GA P P G P ++
Sbjct: 240 QDGA-PGPAGPAGQDGFPGNA 259
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 GXPXAPNAPXXEKXPPXXXXPRXXGGXGPXQXGAXXGXGQPXTKG-RGKXGTXAXXGXLG 406
G P AP + P P G G GA G G P G G G G G
Sbjct: 195 GQPGAPGDNGQDGAPGQDGQPGAPGQDGQRGSGAPGGPGAPGNAGPAGPAGQDGAPGQDG 254
Query: 407 AXXXPPXPXGNPAHPXHS 460
P P G P ++
Sbjct: 255 -QPGPAGPAGQDGAPGNA 271
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -1
Query: 450 GXAGLPX--GXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPXPPXXRGXXXX 277
G G P G GG P P +P P P P P P P P +G
Sbjct: 724 GQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGL--PGLPGTKGEGGY 781
Query: 276 GGXFSXXGAXGAXGXP 229
G G G G P
Sbjct: 782 PGRPGEVGQPGFPGLP 797
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/74 (29%), Positives = 23/74 (31%)
Frame = -1
Query: 450 GXAGLPXGXGGXXXAPRXPXFAXVPXFPRPXVXGXPXPXXAPXWXGPXPPXXRGXXXXGG 271
G G P G P P A P P P G P AP P P G G
Sbjct: 237 GNPGAPGVPGQVIEVPGTPGPAGPPGPPGPI--GPPGQPGAPGSSQPGPQGPPGDPGIDG 294
Query: 270 XFSXXGAXGAXGXP 229
G+ G G P
Sbjct: 295 APGNPGSPGEPGPP 308
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 244 GXGGPXGFXXFYXVFXXFFGAGG 176
G GG GF + VF FFG GG
Sbjct: 75 GGGGGEGFHNPFDVFDMFFGGGG 97
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 9.5
Identities = 22/93 (23%), Positives = 23/93 (24%)
Frame = +3
Query: 225 PXGPPXPXMPPXXKXPPXXXXPXGXXGXGXPXXXGXXXGXXNPXXRXXGKXXXWQXXXX* 404
P GP P PP P G G G P
Sbjct: 170 PAGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPA-- 227
Query: 405 GXPXTRXXPGATXXTPXTAPSXAXSPXPXXXXG 503
G P PG +P AP A P P G
Sbjct: 228 GPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAG 260
Score = 28.3 bits (60), Expect = 9.5
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 3/77 (3%)
Frame = -1
Query: 450 GXAGLPXGXGGXXXAPRXPXFAXVPXFPRPXVXGX---PXPXXAPXWXGPXPPXXRGXXX 280
G AG P G G P A +P P G P P P G P G
Sbjct: 193 GPAG-PAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAG 251
Query: 279 XGGXFSXXGAXGAXGXP 229
G GA G G P
Sbjct: 252 PPGPPGPAGAPGPDGNP 268
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 697 PGIPXXPTXGARPXPXXXPPAPGKTPR 777
P +P P P P PP PG TPR
Sbjct: 261 PPVPPPPP-SVTPMPPPMPPTPGMTPR 286
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 231 GPPXPXMPPXXKXPPXXXXPXGXXGXGXP 317
GPP P PP PP P G G P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 231 GPPXPXMPPXXKXPPXXXXPXGXXGXGXP 317
GPP P PP PP P G G P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 697 PGIPXXPTXGARPXPXXXPPAPGKTPR 777
P +P P P P PP PG TPR
Sbjct: 271 PPVPPPPP-SVTPMPPPMPPTPGMTPR 296
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 231 GPPXPXMPPXXKXPPXXXXPXGXXGXGXP 317
GPP P PP PP P G G P
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.3 bits (60), Expect = 9.5
Identities = 31/92 (33%), Positives = 31/92 (33%), Gaps = 1/92 (1%)
Frame = -2
Query: 1001 RARGGXWTXXGXXGGSGXAXXXTVGGERAQDRXLRQXXXRFGXXXVXXVCXXRLXXGRSP 822
R RGG G GGSG GG R DR R G GRSP
Sbjct: 7 RGRGGGGFRGGRGGGSGFTPRGGGGGFRGGDRGRSPGGFRGGDRGRSSSGFRGGDRGRSP 66
Query: 821 XGXGXRXFRXXRXWWRGVLP-GAGGXXXGXGR 729
G FR R G P G GG G R
Sbjct: 67 GG-----FRGDRE--GGFSPRGRGGGFRGGDR 91
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/76 (26%), Positives = 22/76 (28%)
Frame = +1
Query: 181 PPQKXXKKXXKXKXNPXXPPSPXCPXXGKXPPXXXXPXGXGGXGXXPXRGXXXXGXTXXX 360
PPQ +P PP + PP P G G P RG
Sbjct: 314 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG-RPPRGGPGKSSEESS 372
Query: 361 GXXEXRXXGKXGXPRG 408
E G G PRG
Sbjct: 373 ESREGPRGGPRGGPRG 388
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/76 (26%), Positives = 22/76 (28%)
Frame = +1
Query: 181 PPQKXXKKXXKXKXNPXXPPSPXCPXXGKXPPXXXXPXGXGGXGXXPXRGXXXXGXTXXX 360
PPQ +P PP + PP P G G P RG
Sbjct: 335 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG-RPPRGGPGKSSEESS 393
Query: 361 GXXEXRXXGKXGXPRG 408
E G G PRG
Sbjct: 394 ESREGPRGGPRGGPRG 409
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/76 (26%), Positives = 22/76 (28%)
Frame = +1
Query: 181 PPQKXXKKXXKXKXNPXXPPSPXCPXXGKXPPXXXXPXGXGGXGXXPXRGXXXXGXTXXX 360
PPQ +P PP + PP P G G P RG
Sbjct: 320 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG-RPPRGGPGKSSEESS 378
Query: 361 GXXEXRXXGKXGXPRG 408
E G G PRG
Sbjct: 379 ESREGPRGGPRGGPRG 394
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 521 DRGLRPPXXXXGXGGXGXGXRCGGGXXGCPXG 426
+RGL PP G GG G G GGG G G
Sbjct: 177 NRGL-PPSNDFGPGGGGGGMGGGGGSGGSGGG 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,964,531
Number of Sequences: 27780
Number of extensions: 158846
Number of successful extensions: 2040
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2751568594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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