Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_I11
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0364 - 2856598-2857059 89 4e-18
03_02_0560 + 9462996-9463454 88 8e-18
01_06_1288 - 36007432-36007851 88 8e-18
05_07_0203 + 28391707-28392165 88 1e-17
01_01_0366 + 2871188-2871655 88 1e-17
08_02_1090 + 24254172-24254624 87 2e-17
05_05_0111 + 22479971-22480093,22480238-22480471 87 2e-17
01_01_0360 - 2837046-2837507 87 2e-17
01_01_0362 - 2843659-2844468,2844669-2844699,2844824-2844903,284... 85 5e-17
01_01_0358 - 2819235-2819696 85 5e-17
01_01_0331 + 2685802-2686263 85 5e-17
01_01_0329 + 2673479-2673940 85 5e-17
09_06_0354 - 22490833-22491417 69 7e-12
08_02_1089 + 24250953-24251123 58 1e-08
05_04_0454 + 21383068-21384525 29 3.8
01_06_1810 - 40049677-40049951,40050032-40050112,40050201-400503... 29 5.0
06_03_0129 - 16993968-16994158,16994354-16994540,16997204-169975... 28 8.7
>01_01_0364 - 2856598-2857059
Length = 153
Score = 89.0 bits (211), Expect = 4e-18
Identities = 40/71 (56%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A EA +L + KK T+ SREIQ+AV+L++PGELA HA
Sbjct: 80 DIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTAVRLVLPGELAKHA 139
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 140 VSEGTKAVTKF 150
>03_02_0560 + 9462996-9463454
Length = 152
Score = 88.2 bits (209), Expect = 8e-18
Identities = 40/71 (56%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A EA RL + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 79 DIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHA 138
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 139 VSEGTKAVTKF 149
>01_06_1288 - 36007432-36007851
Length = 139
Score = 88.2 bits (209), Expect = 8e-18
Identities = 40/71 (56%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A EA RL + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 66 DIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHA 125
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 126 VSEGTKAVTKF 136
>05_07_0203 + 28391707-28392165
Length = 152
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/71 (54%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A EA +L + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 79 DIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHA 138
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 139 VSEGTKAVTKF 149
>01_01_0366 + 2871188-2871655
Length = 155
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/71 (54%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A EA +L + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 82 DIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHA 141
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 142 VSEGTKAVTKF 152
>08_02_1090 + 24254172-24254624
Length = 150
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/71 (54%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A EA +L + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 77 DIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHA 136
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 137 VSEGTKAVTKF 147
>05_05_0111 + 22479971-22480093,22480238-22480471
Length = 118
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/71 (56%), Positives = 56/71 (78%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+FVND+ EK+ EA RL + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 45 DIGISSKAMSIMNSFVNDIFEKLEQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHA 104
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 105 VSEGTKAVTKF 115
>01_01_0360 - 2837046-2837507
Length = 153
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/71 (54%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A E+ +L + KK T+ SREIQ+AV+L++PGELA HA
Sbjct: 80 DIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTAVRLVLPGELAKHA 139
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 140 VSEGTKAVTKF 150
>01_01_0362 -
2843659-2844468,2844669-2844699,2844824-2844903,
2846680-2847831
Length = 690
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/71 (53%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A E+ +L + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 617 DIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHA 676
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 677 VSEGTKAVTKF 687
>01_01_0358 - 2819235-2819696
Length = 153
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/71 (53%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A E+ +L + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 80 DIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHA 139
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 140 VSEGTKAVTKF 150
>01_01_0331 + 2685802-2686263
Length = 153
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/71 (53%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A E+ +L + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 80 DIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHA 139
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 140 VSEGTKAVTKF 150
>01_01_0329 + 2673479-2673940
Length = 153
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/71 (53%), Positives = 57/71 (80%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
++GIS K+M IMN+F+ND+ EK+A E+ +L + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 80 DIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHA 139
Query: 421 NSEGMKAISMY 453
SEG KA++ +
Sbjct: 140 VSEGTKAVTKF 150
>09_06_0354 - 22490833-22491417
Length = 194
Score = 68.5 bits (160), Expect = 7e-12
Identities = 35/71 (49%), Positives = 50/71 (70%)
Frame = +1
Query: 241 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 420
+LG S ++M +++ + DM E++A EA RL + TL SRE+QSAV+L++P +LA HA
Sbjct: 122 DLGASAQTMDVLDMMMADMFERLADEASRLSKLSGRLTLTSREVQSAVRLVLPADLANHA 181
Query: 421 NSEGMKAISMY 453
SEG KAIS Y
Sbjct: 182 ISEGTKAISNY 192
>08_02_1089 + 24250953-24251123
Length = 56
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +1
Query: 295 MLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 453
M EK+ EA +L + KK T+ SREIQ++V+L++ GELA HA SEG KA++ +
Sbjct: 1 MFEKLVGEAAKLARYNKKPTITSREIQTSVRLVLLGELAKHAVSEGAKAVTKF 53
>05_04_0454 + 21383068-21384525
Length = 485
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 291 RYAGEDRRGSRKAGRPRQ-EEYSGQQRNPICRQVTSTGRAGHTRQLRGHEGHKHVPFEQK 467
+YAGED GSR+ +Q + + GQQR+ + A R + K+ EQ+
Sbjct: 394 QYAGEDSYGSRQIPANQQHQHFRGQQRHVVKPYYARGFDASDDRATNAGKQAKYDHPEQQ 453
Query: 468 ERLQKQ 485
+R +Q
Sbjct: 454 QRAYQQ 459
>01_06_1810 -
40049677-40049951,40050032-40050112,40050201-40050371,
40050434-40050497,40050689-40050777,40051244-40051378,
40051464-40051515
Length = 288
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 330 QPSGFHGDLLQHIVNEVIH 274
+P GFHGD+ H +N+ IH
Sbjct: 220 KPCGFHGDVTLHDINQRIH 238
>06_03_0129 -
16993968-16994158,16994354-16994540,16997204-16997517,
16997600-16997828
Length = 306
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 222 EGRHARQPGHLEEVDVDHE*LR*RYAGEDRRGSRKAGRPRQEEYSG 359
EG G +E+D+ LR R + ++RG K+G PR E G
Sbjct: 217 EGLGEHGGGGEDEIDLGGPMLRPRGSAANKRGKAKSGWPRGESCGG 262
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,710,593
Number of Sequences: 37544
Number of extensions: 288529
Number of successful extensions: 779
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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