Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_I10
(956 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.019
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.045
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.060
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.060
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.18
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.42
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 0.47
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.97
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 1.3
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.0
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 9.0
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.019
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 420 SXPTXPXPPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPPP 551
S PT P PP PP P PP P AP P P
Sbjct: 1703 SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 30.3 bits (65), Expect = 0.42
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 426 PTXPXPPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPPP 551
P PP+ + PP PPP P AP G PPP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPP-PSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 849 APAXPXSRXPRXRXPXXPPPRGGXPPXPXXXARPPP 956
APA P S P PP P P + PPP
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP 1717
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.045
Identities = 40/164 (24%), Positives = 43/164 (26%), Gaps = 3/164 (1%)
Frame = +3
Query: 474 PPPPXPPPXPXAPRAXGGXAPXXPPPRXVXXXXXXXXXXXXXQGXARXRPXPAPGPXXXP 653
PP P P P P++ G AP PPP V G P P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSG-APSAPPP--VPAPSSEIPSIPAPSG-----APPVPAPSGIP 1092
Query: 654 XPXXFPXXSXPPXRXSXXPXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRXPXRX 833
P P + PP P P P
Sbjct: 1093 -PVPKPSVAAPP-----VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Query: 834 AGXPRAPA---XPXSRXPRXRXPXXPPPRGGXPPXPXXXARPPP 956
P PA P P P P P G PP P A PP
Sbjct: 1147 VAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Score = 31.1 bits (67), Expect = 0.24
Identities = 41/179 (22%), Positives = 46/179 (25%), Gaps = 4/179 (2%)
Frame = +3
Query: 429 TXPXPPRGAGXXXXGPPPPXP-PPXPXAPRAXGGXAPXXPPPRXVXXXXXXXXXXXXXQG 605
T P P +G PP P P P P G AP P P +
Sbjct: 1049 TPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG--APPVPAPSGIPPVPKPSVAAPPVPK 1106
Query: 606 XARXRPXPAPGPXXXPXPXXFPXXSXPPXRXSXXPXPXXXXXXXXXXXXXXXXXXXXXXX 785
+ P P P P P P P + PP P P
Sbjct: 1107 PSVAVP-PVPAPSGAP-PVPKPSVAAPP-----VPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Query: 786 XXXXXXXXXFRXPXRXAGXPRAP---AXPXSRXPRXRXPXXPPPRGGXPPXPXXXARPP 953
P +G P P A P P P P G PP P PP
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 29.9 bits (64), Expect = 0.55
Identities = 24/94 (25%), Positives = 27/94 (28%)
Frame = +3
Query: 435 PXPPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPPPRXVXXXXXXXXXXXXXQGXAR 614
P P AG PP P P P P+ G P PP A+
Sbjct: 1180 PVPKPAAGV----PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAK 1235
Query: 615 XRPXPAPGPXXXPXPXXFPXXSXPPXRXSXXPXP 716
P PAP P S P + P P
Sbjct: 1236 APPVPAPSSEAPSVST--PRSSVPSPHSNASPSP 1267
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +1
Query: 835 PXXPGPRPXPXPGXXAXAXPXXPPPXGXXPXPXXGXPGPP 954
P P P P + A P P P G P P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 28.3 bits (60), Expect = 1.7
Identities = 35/178 (19%), Positives = 38/178 (21%), Gaps = 2/178 (1%)
Frame = +3
Query: 426 PTXPXPPRGAGXXXXGPPPPXPPP-XPXAPRAXGGXAPXXPPPRXVXXXXXXXXXXXXXQ 602
PT P G GP P PP P P + +P PP+
Sbjct: 945 PTKLTRPSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSP 1004
Query: 603 GXARXRPXPAPGPXXXPXPXXFPXXSXPPXR-XSXXPXPXXXXXXXXXXXXXXXXXXXXX 779
R P P P P PP S P
Sbjct: 1005 AAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Query: 780 XXXXXXXXXXXFRXPXRXAGXPRAPAXPXSRXPRXRXPXXPPPRGGXPPXPXXXARPP 953
P P P P P P P PP P PP
Sbjct: 1065 PVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 876 PRXRXPXXPPPRGGXPPXPXXXARPPP 956
P P P P G PP P A+ PP
Sbjct: 1212 PPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +1
Query: 835 PXXPGPRPXPXPGXXAXAXPXXPPPXGXXPXPXXGXPGPP 954
P P P P + A P P P G P P PP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Frame = +1
Query: 829 GXPXXPGPRPXP---XPGXXAXA-XPXXPPPXGXXPXPXXGXPGPP 954
G P P P P P P A + P P P G P P PP
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 829 GXPXXPGPRPXPXPGXXAXAXPXXPPPXGXXPXPXXGXPGPP 954
G P P P P + P PPP P P PP
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +1
Query: 829 GXPXXPGPRPXPXP-GXXAXAXPXXPPPXGXXPXPXXGXPGPP 954
G P P P P + A P P P G P P PP
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 26.2 bits (55), Expect = 6.8
Identities = 19/73 (26%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = +3
Query: 474 PPPPXPPPX-PXAPRAXGGXAPXXPPPRXVXXXXXXXXXXXXXQGXARXRPXPAPGPXXX 650
PP P P P P+ G P PPP + P P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPP-VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Query: 651 PXPXXFPXXSXPP 689
P P P PP
Sbjct: 1228 PVP--VPTAKAPP 1238
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.060
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = +3
Query: 441 PPRGAGXXXXGPPPPXPPPXPXAPRA-----XGGXAPXXPPPR 554
PP G G PPP PPP A + G AP PPPR
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Score = 29.9 bits (64), Expect = 0.55
Identities = 21/74 (28%), Positives = 22/74 (29%)
Frame = +3
Query: 420 SXPTXPXPPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPPPRXVXXXXXXXXXXXXX 599
S P P PP PP PP P A AP PP +
Sbjct: 413 STPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPA----APPLPPSAPIAPPLPAGMPAAPP 468
Query: 600 QGXARXRPXPAPGP 641
A P PAP P
Sbjct: 469 LPPAAPAPPPAPAP 482
Score = 27.9 bits (59), Expect = 2.2
Identities = 25/93 (26%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Frame = +3
Query: 441 PPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPPPRXVXXXXXXXXXXXXXQGXARXR 620
PP G PP P PP P P A P PP G
Sbjct: 404 PPLGNASRTSTPPVPTPPSLP--PSAPPSLPPSAPP--------------SLPMGAPAAP 447
Query: 621 PXPAPGPXXXPXPXXFP-XXSXPPXRXSXXPXP 716
P P P P P P PP + P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 26.6 bits (56), Expect = 5.2
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +3
Query: 420 SXPTXPXPPR-GAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPP 548
S P P PPR A PP P P PR+ PP
Sbjct: 335 SLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.060
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 435 PXPPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPPPR 554
P PP G GPPPP PPP + GG P P+
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAV---SAGGSRYYAPAPQ 798
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +3
Query: 435 PXPPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPPPRXV 560
P PP GPPPP PPP A G P PPP V
Sbjct: 750 PVPP--PAPIMGGPPPPPPPPGV----AGAGPPPPPPPPPAV 785
Score = 30.7 bits (66), Expect = 0.32
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 426 PTXPXPPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPP 548
P P PP G PPPP PP AP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 29.5 bits (63), Expect = 0.73
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +3
Query: 435 PXPPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPPP 551
P PP A P P P P P AP GG P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP-AP-IMGGPPPPPPPP 768
Score = 29.5 bits (63), Expect = 0.73
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 844 PGPRPXPXPGXXAXAXPXXPPPXGXXPXPXXGXPGPP 954
P P P P P P PPP G P PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 835 PXXPGPRPXPXPGXXAXAXPXXPPP 909
P GP P P P A A P PPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +3
Query: 426 PTXPXPPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPPPR 554
P P PP AG PPPP P R P P+
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
Score = 27.9 bits (59), Expect = 2.2
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 1/76 (1%)
Frame = +3
Query: 435 PXPPRGAGXXXXGPPP-PXPPPXPXAPRAXGGXAPXXPPPRXVXXXXXXXXXXXXXQGXA 611
P PP P P P PPP P G P PPP V A
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIM-----GGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Query: 612 RXRPXPAPGPXXXPXP 659
AP P P P
Sbjct: 788 GGSRYYAPAPQAEPEP 803
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = -1
Query: 956 GGGPGXPXXGXGXXPXGGGXXGXAXAXXPG--XGXGRGPGXXGXP 828
GGGPG G G G G G G G G GPG G P
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 29.5 bits (63), Expect = 0.73
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 956 GGGPGXPXXGXGXXPXGGGXXGXAXAXXPGXGXGRGPG 843
GGG G P G G GG G G G GPG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 954 GGAGRXXXGXGXXPXG-GGAXGGXXXXXPGXGGRPGPG 844
GG G G G G GG GG G GG GPG
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = -2
Query: 955 GGGRAXXXGXGGXPPRG----GGXXGXRXRGXREXGXAGARGXPAXRXG 821
GGG G G PP G GG G G G G G P G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEG 235
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.42
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -2
Query: 952 GGRAXXXGXGGXPPRGGGXXGXRXRGXREXGXAGARGXPAXRXGXR 815
GGR G G G G G G R G GARG R G R
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGAR 54
Score = 29.1 bits (62), Expect = 0.97
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -2
Query: 955 GGGRAXXXGXGGXPPRG--GGXXGXR-XRGXREXGXAGARG 842
GGGR G G RG GG G R RG G GA+G
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 26.2 bits (55), Expect = 6.8
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = -3
Query: 954 GGAGRXXXGXGXXPXGG--GAXGGXXXXXPGXGGRPGPGXXRXXXPG 820
GG G G G GG GA GG GGR G R G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.6 bits (51), Expect(2) = 0.47
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +3
Query: 474 PPPPXPPPXPXAPRAXGGXAP 536
PPPP PPP +A P
Sbjct: 189 PPPPPPPPPAVEDQAADANEP 209
Score = 23.8 bits (49), Expect(2) = 0.47
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +3
Query: 426 PTXPXPPRGAGXXXXGPPPPXPPP 497
P+ P PPPP PPP
Sbjct: 174 PSAAAPATSLPSDYNPPPPPPPPP 197
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.97
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 834 AGXPRAPAXPXSRXPRXRXPXXPPPRGGXPPXPXXXARPPP 956
A P APA P + R P PPR PP A P P
Sbjct: 122 AAPPSAPAPPTPQS-ELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 899 APPPXGXSPXPXXXRPAPP 955
APPP +P P PAPP
Sbjct: 4 APPPPPPAPAPAAAAPAPP 22
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 SXPTXPXPPRGAGXXXXGPP-PPXPPPXPXAPRAXGGXAPXXP 545
S P P P PP P PPP P + AP P
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 24.2 bits (50), Expect(2) = 1.3
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 480 PPXPPPXPXAPRAXGG 527
PP PPP P A GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 22.6 bits (46), Expect(2) = 1.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 474 PPPPXPPPXP 503
P PP PPP P
Sbjct: 905 PTPPPPPPLP 914
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 426 PTXPXPPRGAGXXXXGPPPPXPPPXPXAPRAXGGXAPXXPP 548
P+ P PP A P P PP P P A P PP
Sbjct: 662 PSVPQPP-AAPVVPEVPSVPQPPAVPVVPEAGQLNEPVVPP 701
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 477 PPPXPPPXPXAPRAXGGXAPXXPPP 551
PP PPP P P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 835 PXXPGPRPXPXPGXXAXAXPXXPPPXG 915
P P P P P PG + P PPP G
Sbjct: 6 PGNPPP-PPPPPGFEPPSQPPPPPPPG 31
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 890 PPXAPPPXGXSPXPXXXRPAPP 955
PP PPP G P P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 435 PXPPRGAGXXXXGPPPPXPPP 497
P PP G PPP PPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 471 GPPPPXPPPXPXAPRAXGGXAPXXPPPRXV 560
G PPP PPP P + P PPP V
Sbjct: 7 GNPPPPPPPPGFEPPS---QPPPPPPPGYV 33
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 474 PPPPXPPPXPXAPRA 518
PP P PPP P P A
Sbjct: 807 PPAPLPPPAPPLPTA 821
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,192,140
Number of Sequences: 5004
Number of extensions: 15359
Number of successful extensions: 286
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 489310570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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