Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_I08
         (1209 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P48608 Cluster: Protein diaphanous; n=5; Endopterygota|...    32   2.4  
UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    34   8.5  

>UniRef50_P48608 Cluster: Protein diaphanous; n=5;
           Endopterygota|Rep: Protein diaphanous - Drosophila
           melanogaster (Fruit fly)
          Length = 1091

 Score = 32.3 bits (70), Expect(2) = 2.4
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +2

Query: 644 PPPPXGGGGKXXXXPXPXKKXFLGGXGXPP 733
           PPPP GGGG     P P      GG   PP
Sbjct: 514 PPPPPGGGGAPPPPPPPMPGRAGGGPPPPP 543



 Score = 22.2 bits (45), Expect(2) = 2.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 818 GGXXPPPPP 844
           GG  PPPPP
Sbjct: 536 GGGPPPPPP 544


>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 33.9 bits (74), Expect = 8.5
 Identities = 29/100 (29%), Positives = 30/100 (30%), Gaps = 7/100 (7%)
 Frame = -1

Query: 984 PPXXXXGGXXFXXGGEXXXXXXXXXXXXKXXXFFXPPPKXXXXXFXXGGGG-------GX 826
           PP    GG  F                 K   F  PPP      F  GGGG       G 
Sbjct: 67  PPRRGGGGVFFYKKKRGGPPPPPTTQKKKNFFFSPPPPPSFWGXFFGGGGGFVXXPPRGG 126

Query: 825 XPPXXGXXKNPPSXXXXXXXXXGAPPXFFXXGGSPXPPKK 706
            PP  G    PP            PP     GG P P +K
Sbjct: 127 APPPPGGAP-PPLFFWGGKRGKKTPPPTHKKGGGPPPREK 165


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,537,788
Number of Sequences: 1657284
Number of extensions: 7264789
Number of successful extensions: 11513
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9648
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 121978212900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)