Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_I03
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 34 0.024
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 33 0.055
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 31 0.17
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 30 0.38
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 29 1.2
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 28 1.6
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 28 1.6
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 28 2.1
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 2.7
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 27 2.7
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 2.7
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 27 3.6
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 27 3.6
SPCC24B10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 26 6.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 8.3
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 26 8.3
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 8.3
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 34.3 bits (75), Expect = 0.024
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 458 KLSVQLQNNNLYPPTQHWPALNPPFQNNKPPADEPLDLSVKHEQPSPAPEIT-YTCETCG 634
K+S L + N T + + N+KP A + K + +P ++ Y CETC
Sbjct: 20 KVSENLMSINSDSGTSNANTPSSVTSNSKPVASST---AAKKDPNAPPQKVKQYVCETCT 76
Query: 635 QTFTMHDRLAKHIASRHRNRTP 700
+ F + L +HI S H N P
Sbjct: 77 RAFARLEHLKRHIRS-HTNEKP 97
Score = 30.3 bits (65), Expect = 0.38
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 581 HEQPSPAPEITYTCETCGQTFTMHDRLAKHIASRHRNRTPEAAR 712
+E+P EI CG+ F+ D L +H HRN P R
Sbjct: 94 NEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHRNPQPRRRR 137
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 7/36 (19%)
Frame = +3
Query: 747 ARSDMLTRHARLHSGLKPXSCS-------ACGQVFS 833
AR + L RH R H+ KP +CS CG+ FS
Sbjct: 80 ARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFS 115
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +2
Query: 674 ASRHRNRTPEAARLYECEVCLRRXGSLGH 760
A + N P+ + Y CE C R L H
Sbjct: 56 AKKDPNAPPQKVKQYVCETCTRAFARLEH 84
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 33.1 bits (72), Expect = 0.055
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 581 HEQPSPAPEITYTCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYECEV 730
H +P P T E C + F+ H +L HI++ H + P +CE+
Sbjct: 107 HRKPKP---YACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCEL 153
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 611 TYTC--ETCGQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLRRXG 748
TY C E C ++FT L KHI+ H E + C+ C + G
Sbjct: 235 TYHCPMEGCKKSFTRSSALKKHISVIH-----EGNMAFHCDSCGTKFG 277
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 750 RSDMLTRHARLHSGLKPXSCSACGQVFS 833
R + L RH R H +K SCS C + F+
Sbjct: 39 RKEHLRRHERTHENVKAFSCSFCNRAFA 66
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 747 ARSDMLTRHARLHSGLKPXSCSACGQVFS 833
AR RH +LH+G+K +C C Q F+
Sbjct: 610 ARQHDKRRHEQLHTGIKAFACVTCNQRFA 638
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 614 YTCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLRRXGSL 754
Y C+ C F H L +H+ R E R Y CE CL+R L
Sbjct: 473 YRCDLCKAGFVRHHDLKRHL------RIHENGRPYVCE-CLKRFNRL 512
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 452 LDKLSVQLQNNNLYPPTQHWPAL-NPPFQNNKPP---ADEPLDLSVKHEQPSPAPE 607
+DK L N+++ + PAL NPP Q++ ADE LD + H + P PE
Sbjct: 215 VDKPISDLIENDIH---ESLPALQNPPIQSHSETDLYADEELDSILMHHERPPIPE 267
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 28.3 bits (60), Expect = 1.6
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = +2
Query: 341 APGHAEGTSGFVGTMAQAAGSPPNTQNLNK---RQRLSRLLDKLSVQLQNNNLYP--PTQ 505
+PG E +S F T A+ + N ++ K + Q++ L P P +
Sbjct: 852 SPGSCETSSAFAKTYAEKEVTSINLPSVRKPLDESYYDHSISPFDPLCQSSFLAPQTPVK 911
Query: 506 HWPALNPPFQNNKPPADEPLDLSVKHEQPSPAP 604
AL P + N PP EP+D S E P P P
Sbjct: 912 SKHAL-PLVEANAPPW-EPIDFSSLLESPVPNP 942
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 27.9 bits (59), Expect = 2.1
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Frame = +2
Query: 317 SCWTKTLVAPGHAEGTSGFVGTMAQAAGSPPNTQNLNKRQRLSRLLDKLSVQLQNNNLYP 496
S TK+ V+ H+ +S M ++ P N + +Q S L S+ ++N +
Sbjct: 292 SSQTKSAVSNNHSRNSSKDASFMMKSF-IPSNRSHPQTQQNESSLFSDNSMVNSSSNSFS 350
Query: 497 --PTQHWP------ALNPPFQNNKPPADEPLDLSVKHEQPSPAPEITYT 619
P P L PFQ KPP+ + + +Q P I +T
Sbjct: 351 LFPNATLPNPPSSELLTTPFQQIKPPSQVFMSTGLLSKQHRPRKNINFT 399
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 482 NNLYPPTQHWPALNPPFQNNKPPADEPLDLSVKHEQPSPAPEI 610
NN PT + PA + P + + P P+ S +P P +
Sbjct: 397 NNFLAPTSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPSL 439
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +2
Query: 614 YTCETCGQT--FTMHDRLAKHIASRH 685
+ CE CG F+ HD L +H+ +H
Sbjct: 610 FRCEICGDQRHFSRHDALVRHLRVKH 635
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 551 ADEPLDLSVKHEQPSPAPEITYTCETCGQTFTMHDRLAKHIAS-RHRNRTPEAAR 712
A + L + ++E+ E CE C + F + H+AS +HR+ + R
Sbjct: 49 AGKILSIQKQNEEVQKKAEFYQNCEVCNKKFYSEGAYSSHMASKKHRDNLSKFQR 103
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +2
Query: 611 TYTCETCGQTFTMHDRLAKHIASRHRNRTP 700
++ C C + F + L +HI S H + P
Sbjct: 422 SFVCPECSKKFKRSEHLRRHIRSLHTSEKP 451
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 750 RSDMLTRHARLHSGLKPXSCS--ACGQVFS 833
R + TRH R H+G KP C+ C + FS
Sbjct: 37 RLEHQTRHIRTHTGEKPHVCTFPGCAKRFS 66
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 747 ARSDMLTRHARLHS 788
+RSD LTRHAR+H+
Sbjct: 66 SRSDELTRHARIHT 79
>SPCC24B10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 199
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 615 IHAKLAAKPSPCTTASPNILLL--DTGIALRRRR 710
+H +LA KP+P + PN++L + G L R++
Sbjct: 158 LHGRLAWKPTPGLMSLPNVVLHVDENGYPLERKK 191
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 8.3
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 512 PALNPPFQNNKPPADEPLDLSVKHEQPSPAPEITYTCETCGQTFTMHDRLAKHIASRHRN 691
PA P Q PP+ + S E + PE+ T E+ + + DR A+ A R
Sbjct: 1182 PAPAAP-QTLNPPSVSTVQQSKPIESNTHTPEVKATSESPSASSNLEDRAARIKAEAQRR 1240
Query: 692 RTPEAARL 715
A L
Sbjct: 1241 MNERLAAL 1248
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 750 RSDMLTRHARLHSGLKPXSCS 812
R + RH R H+G KP CS
Sbjct: 15 RQEHQVRHIRSHTGEKPFECS 35
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 611 TYTCETCGQTFTMHDR 658
TYTCE C Q T+ +R
Sbjct: 537 TYTCEECEQKITLSER 552
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,394,963
Number of Sequences: 5004
Number of extensions: 70944
Number of successful extensions: 262
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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