Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_I02
         (1111 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0318 + 7417361-7417519,7417638-7417690,7417770-7417836,741...    37   0.033
02_01_0022 - 135655-135717,137426-137482,137559-137678,137762-13...    37   0.033

>03_02_0318 +
           7417361-7417519,7417638-7417690,7417770-7417836,
           7417925-7417981,7420005-7420067
          Length = 132

 Score = 36.7 bits (81), Expect = 0.033
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 202 SIGVPXXXXXXAEGHVXTGEXXTGXVXXGXLXEAEDN 312
           S+G+P      A GHV T E  TG V  G + E EDN
Sbjct: 4   SLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDN 40


>02_01_0022 -
           135655-135717,137426-137482,137559-137678,137762-137920
          Length = 132

 Score = 36.7 bits (81), Expect = 0.033
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 202 SIGVPXXXXXXAEGHVXTGEXXTGXVXXGXLXEAEDN 312
           S+G+P      A GHV T E  TG V  G + E EDN
Sbjct: 4   SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDN 40


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,379,724
Number of Sequences: 37544
Number of extensions: 108129
Number of successful extensions: 70
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3339678056
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)