Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_I01
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   1.3  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   7.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   9.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.2  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 124 QPTYCS*MTSIL-DVELCTVSLRCPEILASCKLAIIGLSDGYAQKL 258
           QP   + +T++L D +LC V+L C + +     AI+     Y +++
Sbjct: 13  QPNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQI 58


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 442 RKEFVFSTRNNYT*ALGKLIVSLLN--LTLQIKMR 540
           RK  +F  +N Y     +LIV L N  +T QI  R
Sbjct: 33  RKRLIFQDKNKYNTPKFRLIVRLSNRDITCQIAYR 67


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 148 TSILDVELCTVSLRCPEILASCKLAIIGLSDGYAQKL 258
           T + D +LC V+L C + +     AI+     Y +++
Sbjct: 70  TLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQI 106


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 148 TSILDVELCTVSLRCPEILASCKLAIIGLSDGYAQKL 258
           T + D +LC V+L C + +     AI+     Y +++
Sbjct: 70  TLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQI 106


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 148 TSILDVELCTVSLRCPEILASCKLAIIGLSDGYAQKL 258
           T + D +LC V+L C + +     AI+     Y +++
Sbjct: 70  TLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQI 106


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 353 NELIFKLKKLNWFQRQLESFFRQ 285
           N+L    K +N + RQLE F R+
Sbjct: 730 NDLETSKKNINEYDRQLEDFTRE 752


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,523
Number of Sequences: 2352
Number of extensions: 14322
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)