BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_H23
(859 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 26 1.7
AY341161-1|AAR13725.1| 159|Anopheles gambiae CED6 protein. 25 3.9
AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein. 25 3.9
AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein. 25 3.9
AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein. 25 3.9
AY341160-1|AAR13724.1| 159|Anopheles gambiae CED6 protein. 24 6.8
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 25.8 bits (54), Expect = 1.7
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Frame = -1
Query: 394 INLIGSSTHLRVMLEPHCVMRYSLCDYAVFAKIFVKRANNKHAIHTSNLCAELCQIRQI- 218
+N +T+ V+ H LC+ A+ A+ + + H L E C+I +
Sbjct: 74 VNSEFDNTNFSVIPAEHTAALSILCNEAIMARSKLLPNSFVHLARLKALSLEFCKIAKFS 133
Query: 217 -CVLFAFSDGRVESCR--NLLFPKCFLPILVQSY*KTEKKTLVD 95
VL D R + R N+ +P+ L I ++ +T ++D
Sbjct: 134 STVLAGLGDLRNFTLRTHNIAWPELNLEIEADAFGQTRNLEVLD 177
>AY341161-1|AAR13725.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 24.6 bits (51), Expect = 3.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 491 SSNNAEXILGSWGNQECLPFLNRKLA 414
SSNN+ G+ EC F++ KLA
Sbjct: 109 SSNNSTTSNGTEDRHECFVFISNKLA 134
>AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 24.6 bits (51), Expect = 3.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 491 SSNNAEXILGSWGNQECLPFLNRKLA 414
SSNN+ G+ EC F++ KLA
Sbjct: 109 SSNNSTTSNGTEDRHECFVFISNKLA 134
>AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 24.6 bits (51), Expect = 3.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 491 SSNNAEXILGSWGNQECLPFLNRKLA 414
SSNN+ G+ EC F++ KLA
Sbjct: 109 SSNNSTTSNGTEDRHECFVFISNKLA 134
>AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 24.6 bits (51), Expect = 3.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 491 SSNNAEXILGSWGNQECLPFLNRKLA 414
SSNN+ G+ EC F++ KLA
Sbjct: 109 SSNNSTTSNGTEDRHECFVFISNKLA 134
>AY341160-1|AAR13724.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.8 bits (49), Expect = 6.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 491 SSNNAEXILGSWGNQECLPFLNRKLA 414
SSNN G+ EC F++ KLA
Sbjct: 109 SSNNLTTSNGTEDRHECFVFISNKLA 134
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,713
Number of Sequences: 2352
Number of extensions: 14902
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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