Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_H23
(859 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457207-1|CAG33488.1| 307|Homo sapiens C6orf55 protein. 58 5e-08
BC022536-1|AAH22536.1| 307|Homo sapiens Vps20-associated 1 homo... 58 5e-08
BC006989-1|AAH06989.1| 307|Homo sapiens Vps20-associated 1 homo... 58 5e-08
BC005937-1|AAH05937.1| 307|Homo sapiens VTA1 protein protein. 58 5e-08
AL033522-1|CAI21072.1| 307|Homo sapiens Vps20-associated 1 homo... 58 5e-08
AK000051-1|BAA90909.1| 307|Homo sapiens protein ( Homo sapiens ... 58 5e-08
AF271994-1|AAF76210.1| 307|Homo sapiens dopamine responsive pro... 58 5e-08
AF060225-1|AAG43125.1| 287|Homo sapiens My012 protein protein. 58 5e-08
AF141341-1|AAG49444.1| 223|Homo sapiens LYST-interacting protei... 54 7e-07
AL033522-2|CAI21073.1| 249|Homo sapiens Vps20-associated 1 homo... 44 7e-04
AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin su... 31 5.4
X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated chond... 30 9.4
>CR457207-1|CAG33488.1| 307|Homo sapiens C6orf55 protein.
Length = 307
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +3
Query: 579 KTPEKTKVLMALMDWLEEIKKSHVXXEXXSNDXXAQXHLENYALKXVLYADNQDREQXME 758
KTPE K L LMD LE +KK E + + HLENYALK LYADN+DR
Sbjct: 52 KTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFH 111
Query: 759 KMWSRHF 779
K + F
Sbjct: 112 KNMIKSF 118
Score = 37.5 bits (83), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 752 YGKNVVXAFYTAGMIYDVLTXFXXLTDEAAXNKR 853
+ KN++ +FYTA ++ DV+T F LTDE +++
Sbjct: 110 FHKNMIKSFYTASLLIDVITVFGELTDENVKHRK 143
>BC022536-1|AAH22536.1| 307|Homo sapiens Vps20-associated 1 homolog
(S. cerevisiae) protein.
Length = 307
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +3
Query: 579 KTPEKTKVLMALMDWLEEIKKSHVXXEXXSNDXXAQXHLENYALKXVLYADNQDREQXME 758
KTPE K L LMD LE +KK E + + HLENYALK LYADN+DR
Sbjct: 52 KTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFH 111
Query: 759 KMWSRHF 779
K + F
Sbjct: 112 KNMIKSF 118
Score = 37.5 bits (83), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 752 YGKNVVXAFYTAGMIYDVLTXFXXLTDEAAXNKR 853
+ KN++ +FYTA ++ DV+T F LTDE +++
Sbjct: 110 FHKNMIKSFYTASLLIDVITVFGELTDENVKHRK 143
>BC006989-1|AAH06989.1| 307|Homo sapiens Vps20-associated 1 homolog
(S. cerevisiae) protein.
Length = 307
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +3
Query: 579 KTPEKTKVLMALMDWLEEIKKSHVXXEXXSNDXXAQXHLENYALKXVLYADNQDREQXME 758
KTPE K L LMD LE +KK E + + HLENYALK LYADN+DR
Sbjct: 52 KTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFH 111
Query: 759 KMWSRHF 779
K + F
Sbjct: 112 KNMIKSF 118
Score = 37.5 bits (83), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 752 YGKNVVXAFYTAGMIYDVLTXFXXLTDEAAXNKR 853
+ KN++ +FYTA ++ DV+T F LTDE +++
Sbjct: 110 FHKNMIKSFYTASLLIDVITVFGELTDENVKHRK 143
>BC005937-1|AAH05937.1| 307|Homo sapiens VTA1 protein protein.
Length = 307
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +3
Query: 579 KTPEKTKVLMALMDWLEEIKKSHVXXEXXSNDXXAQXHLENYALKXVLYADNQDREQXME 758
KTPE K L LMD LE +KK E + + HLENYALK LYADN+DR
Sbjct: 52 KTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFH 111
Query: 759 KMWSRHF 779
K + F
Sbjct: 112 KNMIKSF 118
Score = 37.5 bits (83), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 752 YGKNVVXAFYTAGMIYDVLTXFXXLTDEAAXNKR 853
+ KN++ +FYTA ++ DV+T F LTDE +++
Sbjct: 110 FHKNMIKSFYTASLLIDVITVFGELTDENVKHRK 143
>AL033522-1|CAI21072.1| 307|Homo sapiens Vps20-associated 1 homolog
(S. cerevisiae) protein.
Length = 307
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +3
Query: 579 KTPEKTKVLMALMDWLEEIKKSHVXXEXXSNDXXAQXHLENYALKXVLYADNQDREQXME 758
KTPE K L LMD LE +KK E + + HLENYALK LYADN+DR
Sbjct: 52 KTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFH 111
Query: 759 KMWSRHF 779
K + F
Sbjct: 112 KNMIKSF 118
Score = 37.5 bits (83), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 752 YGKNVVXAFYTAGMIYDVLTXFXXLTDEAAXNKR 853
+ KN++ +FYTA ++ DV+T F LTDE +++
Sbjct: 110 FHKNMIKSFYTASLLIDVITVFGELTDENVKHRK 143
>AK000051-1|BAA90909.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ20044 fis, clone COL00456. ).
Length = 307
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +3
Query: 579 KTPEKTKVLMALMDWLEEIKKSHVXXEXXSNDXXAQXHLENYALKXVLYADNQDREQXME 758
KTPE K L LMD LE +KK E + + HLENYALK LYADN+DR
Sbjct: 52 KTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFH 111
Query: 759 KMWSRHF 779
K + F
Sbjct: 112 KNMIKSF 118
Score = 37.5 bits (83), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 752 YGKNVVXAFYTAGMIYDVLTXFXXLTDEAAXNKR 853
+ KN++ +FYTA ++ DV+T F LTDE +++
Sbjct: 110 FHKNMIKSFYTASLLIDVITVFGELTDENVKHRK 143
>AF271994-1|AAF76210.1| 307|Homo sapiens dopamine responsive
protein DRG-1 protein.
Length = 307
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +3
Query: 579 KTPEKTKVLMALMDWLEEIKKSHVXXEXXSNDXXAQXHLENYALKXVLYADNQDREQXME 758
KTPE K L LMD LE +KK E + + HLENYALK LYADN+DR
Sbjct: 52 KTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFH 111
Query: 759 KMWSRHF 779
K + F
Sbjct: 112 KNMIKSF 118
Score = 37.5 bits (83), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 752 YGKNVVXAFYTAGMIYDVLTXFXXLTDEAAXNKR 853
+ KN++ +FYTA ++ DV+T F LTDE +++
Sbjct: 110 FHKNMIKSFYTASLLIDVITVFGELTDENVKHRK 143
>AF060225-1|AAG43125.1| 287|Homo sapiens My012 protein protein.
Length = 287
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +3
Query: 579 KTPEKTKVLMALMDWLEEIKKSHVXXEXXSNDXXAQXHLENYALKXVLYADNQDREQXME 758
KTPE K L LMD LE +KK E + + HLENYALK LYADN+DR
Sbjct: 52 KTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFH 111
Query: 759 KMWSRHF 779
K + F
Sbjct: 112 KNMIKSF 118
Score = 37.5 bits (83), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 752 YGKNVVXAFYTAGMIYDVLTXFXXLTDEAAXNKR 853
+ KN++ +FYTA ++ DV+T F LTDE +++
Sbjct: 110 FHKNMIKSFYTASLLIDVITVFGELTDENVKHRK 143
>AF141341-1|AAG49444.1| 223|Homo sapiens LYST-interacting protein
LIP5 protein.
Length = 223
Score = 54.0 bits (124), Expect = 7e-07
Identities = 30/67 (44%), Positives = 35/67 (52%)
Frame = +3
Query: 579 KTPEKTKVLMALMDWLEEIKKSHVXXEXXSNDXXAQXHLENYALKXVLYADNQDREQXME 758
KTPE K L LMD LE +KK E + + LENYALK LYADN+DR
Sbjct: 53 KTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAXLENYALKMFLYADNEDRAGRFH 112
Query: 759 KMWSRHF 779
K + F
Sbjct: 113 KNMIKSF 119
Score = 37.5 bits (83), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 752 YGKNVVXAFYTAGMIYDVLTXFXXLTDEAAXNKR 853
+ KN++ +FYTA ++ DV+T F LTDE +++
Sbjct: 111 FHKNMIKSFYTASLLIDVITVFGELTDENVKHRK 144
>AL033522-2|CAI21073.1| 249|Homo sapiens Vps20-associated 1 homolog
(S. cerevisiae) protein.
Length = 249
Score = 44.0 bits (99), Expect = 7e-04
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +3
Query: 621 WLEEIKKSHVXXEXXSNDXXAQXHLENYALKXVLYADNQDREQXMEKMWSRHF 779
WL +KK E + + HLENYALK LYADN+DR K + F
Sbjct: 8 WLITLKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSF 60
Score = 37.5 bits (83), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 752 YGKNVVXAFYTAGMIYDVLTXFXXLTDEAAXNKR 853
+ KN++ +FYTA ++ DV+T F LTDE +++
Sbjct: 52 FHKNMIKSFYTASLLIDVITVFGELTDENVKHRK 85
>AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin sulfate
proteoglycan protein.
Length = 2322
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 150 SYQYLYKVTKRPKRKRL-WMITSHKTRRYTTATSE 49
S YLY+V +RP+ RL W T KT T+ T+E
Sbjct: 929 SASYLYEVMERPRHGRLAWRGTQDKTTMVTSFTNE 963
>X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated
chondroitin sulfate proteoglycan (MCSP) protein.
Length = 2322
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 150 SYQYLYKVTKRPKRKRL-WMITSHKTRRYTTATSE 49
S YLY+V +RP+ RL W T KT T+ T+E
Sbjct: 929 SASYLYEVMERPRLGRLAWRGTQDKTTMVTSFTNE 963
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,465,530
Number of Sequences: 237096
Number of extensions: 1930469
Number of successful extensions: 2956
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2956
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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