Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H22
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   2.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   4.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   8.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   8.6  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 501 FHTFFSRMQSLPDDYRCCP 445
           FHT     QSL    +CCP
Sbjct: 794 FHTDIGNSQSLAHQDQCCP 812


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 316 KTILVTAVVQCTKQFRTDLNRKGSMV*FF 230
           K I+    V  TKQ + + N+KG  + F+
Sbjct: 531 KAIIYGFNVNATKQIKDEANKKGVSLRFY 559


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 387 HHKSIWKYGNTQENW 431
           HH + WK GN ++ +
Sbjct: 514 HHDAEWKVGNHEDGY 528


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 387 HHKSIWKYGNTQENW 431
           HH + WK GN ++ +
Sbjct: 429 HHDAEWKVGNHEDGY 443


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 387 HHKSIWKYGNTQENW 431
           HH + WK GN ++ +
Sbjct: 748 HHDAEWKVGNHEDGY 762


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,763
Number of Sequences: 438
Number of extensions: 4823
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)