Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H20
         (968 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600...    30   3.2  
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008...    28   9.7  
07_03_1727 + 29068348-29068571,29069473-29069514,29069593-290698...    28   9.7  

>06_03_0478 -
           21259376-21259465,21259862-21259924,21260025-21260066,
           21260180-21260461,21261084-21261587,21261973-21261981,
           21262122-21262196,21262375-21262449,21262557-21263494,
           21263577-21263607,21263694-21263979,21264691-21264905,
           21265329-21265437,21265556-21265611,21265730-21265822,
           21266348-21266393,21266496-21267221,21267489-21267550,
           21267738-21268013,21268604-21268735,21268835-21268909
          Length = 1394

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +3

Query: 276 RNPITCMKKLPGESGRDFSLRINSALKALHNPVENLDYPEDIDTEDTKGERMAAQRE 446
           ++P    K+  GE G+  S  ++    A HN  EN+    D+D     G+   A+ +
Sbjct: 692 KSPTDASKQKQGELGQGKSTDVDQKEDAGHNAAENMKVDNDMDLLGKDGKEKPAEHD 748


>09_03_0039 +
           11799277-11799486,11799565-11799710,11800758-11800860,
           11800996-11801182,11801299-11801392,11801530-11801683,
           11801963-11802067,11802151-11802267,11802688-11802801,
           11803171-11803260,11803875-11804057,11809196-11809550,
           11809574-11809643,11809993-11810167,11810251-11810351,
           11810390-11810516,11810639-11810716,11811926-11812270
          Length = 917

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 239 ILIESLDFIFLVSFSNFTVFLKRKKA*LEIRGTGWS 132
           I++ESL+FIF     N   +L  +   ++ R T WS
Sbjct: 765 IVLESLNFIFTDEVRNQDAYLVLRSVIIDARETAWS 800


>07_03_1727 +
           29068348-29068571,29069473-29069514,29069593-29069839,
           29069936-29070013,29070551-29070736,29070829-29071126,
           29071775-29072244
          Length = 514

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 405 TEDTKGERMAAQRERRGT*T*KGKERARRLG 497
           T++ +GE+MA  RE     T +G ERAR +G
Sbjct: 381 TQEKRGEQMARAREAAREITPEGTERARVVG 411


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,513,704
Number of Sequences: 37544
Number of extensions: 314079
Number of successful extensions: 879
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2811537600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)