Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H14
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.    149   2e-36
AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical...   149   2e-36
Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical pr...   120   2e-27
Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical pr...   111   5e-25
AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical...   103   1e-22
AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding...    76   3e-14
U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding p...    66   3e-11
U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding p...    66   3e-11
Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical pr...    58   8e-09
Z81565-3|CAH60773.1|  489|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z81565-2|CAB04581.1|  507|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z93374-5|CAB07557.1|  935|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.
          Length = 108

 Score =  149 bits (362), Expect = 2e-36
 Identities = 70/107 (65%), Positives = 82/107 (76%)
 Frame = +3

Query: 207 MGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGW 386
           MGVD + +  G+  T PK GQTV  HY  TL+NGKK DSSRDRG PFKF +GKG+VIKGW
Sbjct: 1   MGVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60

Query: 387 DQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRV 527
           DQG+A+MSVGE++KLT S D  YG RG P  IP NATL+F+VELL V
Sbjct: 61  DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107


>AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical
           protein Y18D10A.19 protein.
          Length = 108

 Score =  149 bits (362), Expect = 2e-36
 Identities = 70/107 (65%), Positives = 82/107 (76%)
 Frame = +3

Query: 207 MGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGW 386
           MGVD + +  G+  T PK GQTV  HY  TL+NGKK DSSRDRG PFKF +GKG+VIKGW
Sbjct: 1   MGVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60

Query: 387 DQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRV 527
           DQG+A+MSVGE++KLT S D  YG RG P  IP NATL+F+VELL V
Sbjct: 61  DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107


>Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical
           protein F31D4.3 protein.
          Length = 431

 Score =  120 bits (288), Expect = 2e-27
 Identities = 56/94 (59%), Positives = 64/94 (68%)
 Frame = +3

Query: 237 GNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVG 416
           G G   P  G TV VHY GTL+NG KFDSSRDRG  F F LG+G+VIKGWD G+A M+ G
Sbjct: 24  GQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKG 83

Query: 417 ERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVEL 518
           E A+ T   D+ YG  G P  IP  ATLIF+VEL
Sbjct: 84  EVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117


>Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical
           protein F36H1.1 protein.
          Length = 139

 Score =  111 bits (268), Expect = 5e-25
 Identities = 51/91 (56%), Positives = 64/91 (70%)
 Frame = +3

Query: 258 KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTC 437
           + G  + +HYTGTL +G +FDSSR R + F FTLG+G+VIKGWDQGL  M VGER  LT 
Sbjct: 43  RKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTI 102

Query: 438 SPDFAYGSRGHPGVIPPNATLIFDVELLRVE 530
            P   YG RG P  IP N+ L FDVEL++++
Sbjct: 103 PPHLGYGERGAPPKIPGNSVLKFDVELMKID 133


>AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical
           protein Y18D10A.25 protein.
          Length = 290

 Score =  103 bits (248), Expect = 1e-22
 Identities = 50/96 (52%), Positives = 63/96 (65%)
 Frame = +3

Query: 198 YKAMGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVI 377
           Y  +GVD + +  G+  T  K GQTV  HY   L +G K DSSRDR  PFKF +GKG+VI
Sbjct: 194 YAKIGVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVI 253

Query: 378 KGWDQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIP 485
           KGWDQG+A+MSV E++KLT +P F +     P  IP
Sbjct: 254 KGWDQGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 37/103 (35%), Positives = 50/103 (48%)
 Frame = +3

Query: 210 GVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWD 389
           G+  +    GNG   P+ GQ V  +    L +     S+ +   P  F +G G+VI G D
Sbjct: 85  GIHHQVDKAGNG-VMPENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLD 143

Query: 390 QGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVEL 518
            G+ KM VGE A    S  + YG  G  G+IP NA+L   V L
Sbjct: 144 IGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCKVRL 186


>AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding
           protein family protein3 protein.
          Length = 261

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
 Frame = +3

Query: 210 GVDVETISPGNGSTYP-KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGW 386
           GV +       G T   + G T+   YT  L++G   DSS  R +PF F +G G VIKG 
Sbjct: 147 GVHIHITHEVEGCTEKAQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGM 206

Query: 387 DQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVEL 518
           D  +  M  GE+ K+   P+ AYG  G P  IP N+ L FD+ L
Sbjct: 207 DIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSL 250



 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = +3

Query: 339 QPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVEL 518
           +P+ FTLGKG+VI G +  +  M VGE+ K+   P+  +   G   V     TL + VEL
Sbjct: 72  KPYTFTLGKGEVIHGMEIAMEGMCVGEQRKVIIPPEQGFDEDGDE-VEGKGETLYYFVEL 130


>U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform a protein.
          Length = 264

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 35/87 (40%), Positives = 43/87 (49%)
 Frame = +3

Query: 258 KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTC 437
           K G T+   Y   L++G   DSS  R  PF F L   +VIKG D  +  M  GER ++  
Sbjct: 169 KSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVI 228

Query: 438 SPDFAYGSRGHPGVIPPNATLIFDVEL 518
             DF YG  G    IP  A L FD+ L
Sbjct: 229 PSDFGYGDDGRAPAIPGKARLYFDITL 255



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
 Frame = +3

Query: 210 GVDVETISPGNGSTYP---KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIK 380
           G++++ I P      P   + G  +   Y  + ++GK+  S+ ++ +P+ FTLGKG VI 
Sbjct: 29  GLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIP 87

Query: 381 GWDQGLAKMSVGERAKLTCSPDFAYGSRGHP-GVIPPNATLIFDVELL 521
           G ++ +  M  GE+ K+    +  +G +G     I  + TL + V+L+
Sbjct: 88  GMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLV 135


>U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform b protein.
          Length = 300

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 35/87 (40%), Positives = 43/87 (49%)
 Frame = +3

Query: 258 KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTC 437
           K G T+   Y   L++G   DSS  R  PF F L   +VIKG D  +  M  GER ++  
Sbjct: 205 KSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVI 264

Query: 438 SPDFAYGSRGHPGVIPPNATLIFDVEL 518
             DF YG  G    IP  A L FD+ L
Sbjct: 265 PSDFGYGDDGRAPAIPGKARLYFDITL 291



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
 Frame = +3

Query: 210 GVDVETISPGNGSTYP---KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIK 380
           G++++ I P      P   + G  +   Y  + ++GK+  S+ ++ +P+ FTLGKG VI 
Sbjct: 65  GLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIP 123

Query: 381 GWDQGLAKMSVGERAKLTCSPDFAYGSRGHP-GVIPPNATLIFDVELL 521
           G ++ +  M  GE+ K+    +  +G +G     I  + TL + V+L+
Sbjct: 124 GMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLV 171


>Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical
           protein ZC455.10 protein.
          Length = 259

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 30/85 (35%), Positives = 42/85 (49%)
 Frame = +3

Query: 264 GQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSP 443
           G  +   Y   L++    DSS  R  PF F L   +VI G D  +  M  GER ++    
Sbjct: 166 GDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMDIAMDGMCEGERRRVVIPS 225

Query: 444 DFAYGSRGHPGVIPPNATLIFDVEL 518
           ++ YGS+G P  IP  A L F++ L
Sbjct: 226 EYGYGSQGSPPEIPGGARLFFEIVL 250



 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = +3

Query: 264 GQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSP 443
           G  V  +Y  T + G +  S+  + +P+ FTLG+  VI G D+ +  M +GE  K+   P
Sbjct: 52  GDVVDQYYKLTDEKGVEIGSNFGK-KPYTFTLGRNQVIPGMDRAMRGMCIGEIRKVVIPP 110

Query: 444 --DFAYGSRGHP 473
              FA  S G P
Sbjct: 111 KLGFAKDSTGQP 122


>Z81565-3|CAH60773.1|  489|Caenorhabditis elegans Hypothetical
           protein K06G5.1b protein.
          Length = 489

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +3

Query: 294 TLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSPDFAYGSRGHP 473
           TL NGK  D+S    +   FT+      K +      + V        SP+  YGS G  
Sbjct: 88  TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144

Query: 474 GVIPPN 491
           G++PP+
Sbjct: 145 GLLPPS 150


>Z81565-2|CAB04581.1|  507|Caenorhabditis elegans Hypothetical
           protein K06G5.1a protein.
          Length = 507

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +3

Query: 294 TLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSPDFAYGSRGHP 473
           TL NGK  D+S    +   FT+      K +      + V        SP+  YGS G  
Sbjct: 88  TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144

Query: 474 GVIPPN 491
           G++PP+
Sbjct: 145 GLLPPS 150


>Z93374-5|CAB07557.1|  935|Caenorhabditis elegans Hypothetical
           protein C06C6.7 protein.
          Length = 935

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 526 TRKSSTSKIRVAFGGITPGWPLEP*AKS-GEHVNFALSPTDIFANP*SHPLMT 371
           T+ S  S IR     ++  + L   +KS  +HV  A +  +++A P + PL+T
Sbjct: 467 TKSSDVSSIRTVLRSLSQSFKLIQNSKSLQKHVTGAQTLNEVYAEPHTQPLVT 519


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,344,707
Number of Sequences: 27780
Number of extensions: 379519
Number of successful extensions: 797
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)