Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_H13
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0313 - 19475203-19475244,19475883-19475976,19476933-194771... 122 3e-28
01_01_0826 + 6431621-6431917,6432356-6432505,6432614-6432796,643... 101 1e-21
05_06_0103 + 25597531-25597608,25597692-25597892,25598599-255987... 86 4e-17
01_01_0824 + 6411899-6411931,6412001-6412210,6412302-6412451,641... 77 2e-14
04_04_1546 - 34301905-34302093,34302549-34302911,34303031-343034... 51 1e-06
02_01_0558 + 4109929-4110042,4110989-4111097,4111404-4111563,411... 30 2.8
01_04_0136 + 16506747-16506982,16507128-16507728,16510443-165108... 30 2.8
03_02_0695 + 10472174-10472286,10472390-10473239 29 3.7
04_04_1586 - 34621945-34623366 29 6.5
>06_03_0313 -
19475203-19475244,19475883-19475976,19476933-19477129,
19477254-19477394,19477873-19478073,19478775-19478894,
19479677-19479859,19479946-19480095,19481305-19481508,
19481545-19481547
Length = 444
Score = 122 bits (295), Expect = 3e-28
Identities = 69/168 (41%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +3
Query: 150 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQ 329
LV +A G EEME + +D+LRR V +A LE + ++ SR+V +V D L +AL KQ
Sbjct: 222 LVPIANGTEEMEATMIIDILRRAKANVVVASLEETLEIVASRKVKMVADVLLDDAL--KQ 279
Query: 330 QYDAVILPGGLEGSDSLSKSEK-VGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGRRVT 506
QYD ++LPGGL G+ + +KS+K +G + K E N HG+ +G++ T
Sbjct: 280 QYDLILLPGGLGGAQAYAKSDKLIGLIKKQAEANKLYGAICASPAIALEPHGLLKGKKAT 339
Query: 507 SYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
S+P +KLS D + + RVVVDGN++TS+GPGT+ F L ++E L
Sbjct: 340 SFPGMWNKLS--DQSECK-NRVVVDGNLITSQGPGTSMEFSLAIVEKL 384
Score = 101 bits (241), Expect = 1e-21
Identities = 67/169 (39%), Positives = 95/169 (56%), Gaps = 2/169 (1%)
Frame = +3
Query: 150 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLE-GSSPVLCSRQVTLVPDKSLTEALAEK 326
LV +A G E ME VITVD+LRR G V++A ++ GS+ V + V L D +L + LA+
Sbjct: 3 LVPIASGTEPMEAVITVDVLRRAGADVSVASVDPGSAQVGGAWGVKLAAD-ALLDDLAD- 60
Query: 327 QQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXH-GVARGRRV 503
++D + LPGG+ GS +L + + ++K H GK G+ G +
Sbjct: 61 AEFDLISLPGGMPGSSNLRDCKLLENMVKKHAGKGKLYAAICAAPAVALGSWGLLNGLKA 120
Query: 504 TSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
T YPS DKL + + VE RV +DGN VTSRGPGTA + + L+E L
Sbjct: 121 TCYPSFMDKLPS-EVNAVE-SRVQIDGNCVTSRGPGTAMEYSVVLVEQL 167
>01_01_0826 +
6431621-6431917,6432356-6432505,6432614-6432796,
6433305-6433385,6433548-6433586,6433646-6433849,
6433933-6434073,6434270-6434437,6434498-6434518
Length = 427
Score = 101 bits (241), Expect = 1e-21
Identities = 61/169 (36%), Positives = 96/169 (56%), Gaps = 2/169 (1%)
Frame = +3
Query: 150 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSR-QVTLVPDKSLTEALAEK 326
LV +A G+EEME + +D+LRR G VT+A +E V+ R + L+ D + E A K
Sbjct: 252 LVPVANGSEEMEALNLIDILRRAGANVTVASVEDKLQVVTRRHKFNLIADIMVEE--AAK 309
Query: 327 QQYDAVILPGGLEGSDSLSKSEKVGALLKDH-EDNGKXXXXXXXXXXXXXXHGVARGRRV 503
+++D +++PGGL G+ LS ++ + LLK E N HG+ +G++
Sbjct: 310 REFDLIVMPGGLPGAQKLSSTKVLVDLLKKQAESNKPYGAICASPAYVLEPHGLLKGKKA 369
Query: 504 TSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
TS+P L+ D + + RVVVDGN++TS+ PG+A F L ++E L
Sbjct: 370 TSFPPMAHLLT--DQSACD-SRVVVDGNLITSKAPGSATEFALAIVEKL 415
Score = 81.4 bits (192), Expect = 9e-16
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 7/201 (3%)
Frame = +3
Query: 69 LSTRSNLFLKTLANYRAFKSRTMS-KSALVILAQGAEEMETVITVDMLRRGGVTVTLAGL 245
++ R+ + + L RAF + K LV +A G E +E T D+L R G VT+A
Sbjct: 1 MARRAASWPRLLLLSRAFAAAAAEPKRVLVPVADGTEPVEAAATADVLNRAGARVTVATA 60
Query: 246 EGSSP-----VLCSRQVTLVPDKSLTEALAEKQQYDAVILPGGLEGSDSLSKSEKVGALL 410
+ + V + V LV D + + E + +D + LPGG+ GS +L + + ++
Sbjct: 61 DPAGDDRGLLVEAAFGVKLVADGRVADL--EGEAFDLIALPGGMPGSANLRDCKVLEKMV 118
Query: 411 KDHEDNGKXXXXXXXXXXXXXXH-GVARGRRVTSYPSTRDKLSAGDYTYVEGERVVVDGN 587
K + G H G+ +G + T YPS +K +A RVVVD N
Sbjct: 119 KKQAEQGGLYAAICATPAVTLAHWGLLKGLKATCYPSFMEKFTAEIIPV--NSRVVVDRN 176
Query: 588 VVTSRGPGTAYWFGLXLIELL 650
VTS+GP TA + L L+E L
Sbjct: 177 AVTSQGPATAIEYALALVEQL 197
>05_06_0103 +
25597531-25597608,25597692-25597892,25598599-25598748,
25598906-25599019,25599699-25599776,25600008-25600208,
25601312-25601399,25601432-25601742
Length = 406
Score = 85.8 bits (203), Expect = 4e-17
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 16/181 (8%)
Frame = +3
Query: 150 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQ 329
L+ +A G+EEME ++ D+LRR V V LA +E S+ ++ S+++ +V DK +++A A
Sbjct: 209 LIPIANGSEEMEIIMLTDVLRRANVNVVLASVEKSTSIVGSQRMRIVADKCISDASA--L 266
Query: 330 QYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHG--------- 482
+YD +ILPGG G++ L KS + LLK+ + G+
Sbjct: 267 EYDLIILPGGPAGAERLHKSSVLKKLLKEQKQTGRMYEAGFTPGDILGLKTLGILYSLAW 326
Query: 483 -------VARGRRVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLI 641
V + + VT++PS ++L+ ++ +VV+DGN++T G GT F L +I
Sbjct: 327 KITAIEIVDQDKTVTAHPSIVNQLTC---EVIDRSKVVIDGNLITGMGLGTVIDFSLAII 383
Query: 642 E 644
+
Sbjct: 384 K 384
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/100 (41%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +3
Query: 93 LKTLANYRAFKSRTMSKSALVI-LAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 269
L A+ A S T +K +++ +A G EEME VI +LRR G VTLA +E V
Sbjct: 8 LSAAASTAASSSTTPAKKKVLLPIAMGTEEMEAVILAGVLRRAGADVTLASVEDGLEVEA 67
Query: 270 SRQVTLVPDKSLTEALAEKQQYDAVILPGGLEGSDSLSKS 389
SR +V DK + A Q +D V LPGG+ GS L S
Sbjct: 68 SRGSHIVADKRI--AACADQVFDLVALPGGMPGSVRLRDS 105
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 564 ERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
+R V G + TSRGPGTA+ F L +E L
Sbjct: 140 KRKKVSGELTTSRGPGTAFQFALSFVEQL 168
>01_01_0824 +
6411899-6411931,6412001-6412210,6412302-6412451,
6413787-6413969,6417705-6417779,6417959-6418102,
6418233-6418418,6418515-6418694
Length = 386
Score = 76.6 bits (180), Expect = 2e-14
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Frame = +3
Query: 138 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLE-GSSPVLCSRQVTLVPDKSLTEA 314
+K LV + G E +E + +D+LRR G VT+A + G V V +V D +
Sbjct: 9 TKKVLVPIVAGTEPVEAAVPIDVLRRAGADVTVASADDGELVVEVMYGVRIVADALVAGG 68
Query: 315 LAEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXH-GVAR 491
+D ++LPGG+ G+ +L + A+++ H G G+
Sbjct: 69 DCAAAHFDLIVLPGGVPGAANLGGCAALEAMVRRHAATGGLYAAICAAPPLALASWGMLN 128
Query: 492 GRRVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
G + T++P DK + V+ VVVD + VTSRGP T+ F L L+E L
Sbjct: 129 GLKATAHPLFVDKFPP-EVAAVDAS-VVVDASAVTSRGPATSTEFALALVEQL 179
Score = 62.9 bits (146), Expect = 3e-10
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Frame = +3
Query: 150 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQ-VTLVPDKSLTEALAEK 326
LV +A G EEME + +D+LRR V +A E + + +R + ++ ++ T + K
Sbjct: 219 LVPVANGTEEMELITIIDVLRRADADVVVASAENAGVEIVARHGMRIITERLNTFSPRLK 278
Query: 327 QQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXX-HGVARGRRV 503
QQ GG G+ ++S +EK+ LLK K HG+ G++
Sbjct: 279 QQ-------GGTPGAKTMSSNEKLVTLLKKQAAASKPYGAIGAATAHVLEPHGLLEGKKA 331
Query: 504 TSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
GD RVVVDGNV+TS G GTA F + +E L
Sbjct: 332 ADQ-------DGGDECE---SRVVVDGNVITSGGTGTAMEFAVAAVEKL 370
>04_04_1546 -
34301905-34302093,34302549-34302911,34303031-34303471,
34304331-34304447,34304540-34304593
Length = 387
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +3
Query: 321 EKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGRR 500
+ YDA+++PGG + L+ ++KV +L+K D K GV +GR+
Sbjct: 270 DASSYDALVIPGG-RAPEYLALNDKVISLVKGFMDKAKPVASICHGQQILSAAGVLQGRK 328
Query: 501 VTSYPSTRDKLSAGDYTYVEG---ERVVVDGNVVTSRG-PG 611
T+YP+ + + G T++E +R DGN+VT PG
Sbjct: 329 CTAYPAVKLNVVLGGATWLEPNPIDRCFTDGNLVTGAAWPG 369
>02_01_0558 +
4109929-4110042,4110989-4111097,4111404-4111563,
4111721-4111796,4111984-4112109,4112233-4112484
Length = 278
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 201 DMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPD 296
DM+ RG ++ L L G SP L RQ VPD
Sbjct: 201 DMVARGALSCGLGHLGGLSPALNPRQACRVPD 232
>01_04_0136 +
16506747-16506982,16507128-16507728,16510443-16510842,
16513595-16513709,16513776-16514352
Length = 642
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 138 SKSALVILAQGAEEMETVITVDMLRRGG--VTVTLAGLEGSSPVLCSRQVTLVPDKSLT 308
+K A VI++ E ET+ V +L + ++ +L L+G SP LC+ + + + SL+
Sbjct: 528 NKEAPVIISDKLSEDETIRLVTVLEKHHSIMSCSLQDLKGISPALCTHCIPIELESSLS 586
>03_02_0695 + 10472174-10472286,10472390-10473239
Length = 320
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 531 LSAGDYTYVEGERVVVDGNVVTSR 602
L++ D Y+ G +VVDG V TSR
Sbjct: 292 LASDDSRYISGHNLVVDGGVTTSR 315
>04_04_1586 - 34621945-34623366
Length = 473
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 143 VCVSDFGAGCRGDGDSYNC*YAETRRGNSYS 235
+C + G GC G GD+ C Y+ T SY+
Sbjct: 189 ICRTLSGTGCGGGGDAGKCDYSVTYGDGSYT 219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,332,324
Number of Sequences: 37544
Number of extensions: 303615
Number of successful extensions: 873
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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