Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H13
         (883 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D61380-1|BAA09603.2|  189|Homo sapiens DJ-1 protein protein.          152   2e-36
BC008188-1|AAH08188.1|  189|Homo sapiens Parkinson disease (auto...   152   2e-36
AL034417-1|CAB52550.1|  189|Homo sapiens Parkinson disease (auto...   152   2e-36
AF021819-1|AAC12806.1|  189|Homo sapiens RNA-binding protein reg...   152   2e-36
AB073864-1|BAB71782.1|  189|Homo sapiens DJ-1 protein.                152   2e-36
AY648999-1|AAT68961.1|   52|Homo sapiens DJ-1 protein.                 38   0.048

>D61380-1|BAA09603.2|  189|Homo sapiens DJ-1 protein protein.
          Length = 189

 Score =  152 bits (368), Expect = 2e-36
 Identities = 82/172 (47%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
 Frame = +3

Query: 138 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 317
           SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G  PV CSR V + PD SL +A 
Sbjct: 3   SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62

Query: 318 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 497
            E   YD V+LPGG  G+ +LS+S  V  +LK+ E+                 H +  G 
Sbjct: 63  KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121

Query: 498 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
           +VT++P  +DK ++ G YTY E  RV  DG ++TSRGPGT++ F L ++E L
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEAL 172


>BC008188-1|AAH08188.1|  189|Homo sapiens Parkinson disease
           (autosomal recessive, early onset) 7 protein.
          Length = 189

 Score =  152 bits (368), Expect = 2e-36
 Identities = 82/172 (47%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
 Frame = +3

Query: 138 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 317
           SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G  PV CSR V + PD SL +A 
Sbjct: 3   SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62

Query: 318 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 497
            E   YD V+LPGG  G+ +LS+S  V  +LK+ E+                 H +  G 
Sbjct: 63  KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121

Query: 498 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
           +VT++P  +DK ++ G YTY E  RV  DG ++TSRGPGT++ F L ++E L
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEAL 172


>AL034417-1|CAB52550.1|  189|Homo sapiens Parkinson disease
           (autosomal recessive, early onset) 7 protein.
          Length = 189

 Score =  152 bits (368), Expect = 2e-36
 Identities = 82/172 (47%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
 Frame = +3

Query: 138 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 317
           SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G  PV CSR V + PD SL +A 
Sbjct: 3   SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62

Query: 318 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 497
            E   YD V+LPGG  G+ +LS+S  V  +LK+ E+                 H +  G 
Sbjct: 63  KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121

Query: 498 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
           +VT++P  +DK ++ G YTY E  RV  DG ++TSRGPGT++ F L ++E L
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEAL 172


>AF021819-1|AAC12806.1|  189|Homo sapiens RNA-binding protein
           regulatory subunit protein.
          Length = 189

 Score =  152 bits (368), Expect = 2e-36
 Identities = 82/172 (47%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
 Frame = +3

Query: 138 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 317
           SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G  PV CSR V + PD SL +A 
Sbjct: 3   SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62

Query: 318 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 497
            E   YD V+LPGG  G+ +LS+S  V  +LK+ E+                 H +  G 
Sbjct: 63  KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121

Query: 498 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
           +VT++P  +DK ++ G YTY E  RV  DG ++TSRGPGT++ F L ++E L
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEAL 172


>AB073864-1|BAB71782.1|  189|Homo sapiens DJ-1 protein.
          Length = 189

 Score =  152 bits (368), Expect = 2e-36
 Identities = 82/172 (47%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
 Frame = +3

Query: 138 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 317
           SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G  PV CSR V + PD SL +A 
Sbjct: 3   SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62

Query: 318 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 497
            E   YD V+LPGG  G+ +LS+S  V  +LK+ E+                 H +  G 
Sbjct: 63  KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGCGS 121

Query: 498 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
           +VT++P  +DK ++ G YTY E  RV  DG ++TSRGPGT++ F L ++E L
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEAL 172


>AY648999-1|AAT68961.1|   52|Homo sapiens DJ-1 protein.
          Length = 52

 Score = 37.9 bits (84), Expect = 0.048
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = +3

Query: 546 YTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
           YTY E  RV  D  ++TSRGPGT++ F L ++E L
Sbjct: 2   YTYSEN-RVEKDSLILTSRGPGTSFEFALAIVEAL 35


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,901,772
Number of Sequences: 237096
Number of extensions: 1635920
Number of successful extensions: 3711
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3691
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)