Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_H13
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80836-12|AAB37889.1| 187|Caenorhabditis elegans Dj-1 (mammalia... 146 2e-35
AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical ... 109 3e-24
AJ271466-1|CAB69047.1| 341|Caenorhabditis elegans fructose-1,6-... 29 3.3
AC006670-1|AAF39910.1| 341|Caenorhabditis elegans Fructose-1,6-... 29 3.3
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 29 5.8
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp... 29 5.8
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical... 29 5.8
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 29 5.8
Z92826-1|CAB07320.1| 263|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81131-6|CAE17977.2| 734|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81131-5|CAB03422.2| 608|Caenorhabditis elegans Hypothetical pr... 28 7.7
AY241925-2|AAO85273.1| 734|Caenorhabditis elegans chondroitin d... 28 7.7
AY241925-1|AAO85274.1| 736|Caenorhabditis elegans chondroitin d... 28 7.7
AB088398-1|BAC76781.1| 715|Caenorhabditis elegans chondroitin s... 28 7.7
AB088397-1|BAC76780.1| 726|Caenorhabditis elegans chondroitin s... 28 7.7
>U80836-12|AAB37889.1| 187|Caenorhabditis elegans Dj-1 (mammalian
transcriptionalregulator) related protein 1.1 protein.
Length = 187
Score = 146 bits (354), Expect = 2e-35
Identities = 80/171 (46%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Frame = +3
Query: 141 KSALVILA-QGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 317
KSAL+ILA +GAEEME +IT D+L RG + V AGL+G+ PV C+R +VPD L +
Sbjct: 4 KSALIILAAEGAEEMEVIITGDVLARGEIRVVYAGLDGAEPVKCARGAHIVPDVKLED-- 61
Query: 318 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 497
E +++D VILPGG GS++L++S V +LK ++G HGV +
Sbjct: 62 VETEKFDIVILPGGQPGSNTLAESLLVRDVLKSQVESGGLIGAICAAPIALLSHGV-KAE 120
Query: 498 RVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
VTS+PS ++KL G Y Y E +RVVV G ++TSRGPGTA+ F L ++ELL
Sbjct: 121 LVTSHPSVKEKLEKGGYKYSE-DRVVVSGKIITSRGPGTAFEFALKIVELL 170
>AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical
protein C49G7.11 protein.
Length = 186
Score = 109 bits (262), Expect = 3e-24
Identities = 61/171 (35%), Positives = 99/171 (57%), Gaps = 1/171 (0%)
Frame = +3
Query: 141 KSALVILA-QGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 317
KSAL++L + AEE+E ++T D+L RGG+ V AG + PV C++ +VPD +L +
Sbjct: 5 KSALILLPPEDAEEIEVIVTGDVLVRGGLQVLYAG-SSTEPVKCAKGARIVPDVALKDV- 62
Query: 318 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 497
+ + +D +I+PGG G L++ +G LLK +G HG+
Sbjct: 63 -KNKTFDIIIIPGG-PGCSKLAECPVIGELLKTQVKSGGLIGAICAGPTVLLAHGIV-AE 119
Query: 498 RVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLXLIELL 650
RVT + + +DK++ G Y Y++ + VV+ V+TS+GPGTA+ F L ++E L
Sbjct: 120 RVTCHYTVKDKMTEGGYKYLD-DNVVISDRVITSKGPGTAFEFALKIVETL 169
>AJ271466-1|CAB69047.1| 341|Caenorhabditis elegans
fructose-1,6-bisphosphatase protein.
Length = 341
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 135 MSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 269
M KS+ +EE + +I V+ RRG VT L+GSS + C
Sbjct: 89 MLKSSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDC 133
>AC006670-1|AAF39910.1| 341|Caenorhabditis elegans
Fructose-1,6-biphosphatase protein1 protein.
Length = 341
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 135 MSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 269
M KS+ +EE + +I V+ RRG VT L+GSS + C
Sbjct: 89 MLKSSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDC 133
>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1121
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +3
Query: 102 LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 281
L NY+ + K+ ++ A+ E + I ++ RRG G +PVL V
Sbjct: 770 LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829
Query: 282 TLVPDKSLTEALAEKQQYDAVIL 350
+ +S ++ KQ D V+L
Sbjct: 830 GIAMGQSGSD--IAKQTADIVLL 850
>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +3
Query: 102 LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 281
L NY+ + K+ ++ A+ E + I ++ RRG G +PVL V
Sbjct: 770 LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829
Query: 282 TLVPDKSLTEALAEKQQYDAVIL 350
+ +S ++ KQ D V+L
Sbjct: 830 GIAMGQSGSD--IAKQTADIVLL 850
>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
protein Y105E8A.12b protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +3
Query: 102 LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 281
L NY+ + K+ ++ A+ E + I ++ RRG G +PVL V
Sbjct: 770 LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829
Query: 282 TLVPDKSLTEALAEKQQYDAVIL 350
+ +S ++ KQ D V+L
Sbjct: 830 GIAMGQSGSD--IAKQTADIVLL 850
>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
protein Y105E8A.12a protein.
Length = 1121
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +3
Query: 102 LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 281
L NY+ + K+ ++ A+ E + I ++ RRG G +PVL V
Sbjct: 770 LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829
Query: 282 TLVPDKSLTEALAEKQQYDAVIL 350
+ +S ++ KQ D V+L
Sbjct: 830 GIAMGQSGSD--IAKQTADIVLL 850
>Z92826-1|CAB07320.1| 263|Caenorhabditis elegans Hypothetical
protein C18D11.1 protein.
Length = 263
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 516 WGMTSRAGPSPRRGLQTLW-EQHKWQQ*FSHY 424
+G T P P RG + EQH+ QQ + HY
Sbjct: 224 YGETHAVAPPPHRGATDYYPEQHRPQQQYGHY 255
>Z81131-6|CAE17977.2| 734|Caenorhabditis elegans Hypothetical
protein T24D1.1b protein.
Length = 734
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 51 LMLLLSLSTRSNLFLKTLANYRAFKSR---TMSKSALVILAQGAEEMETVITVDMLRRGG 221
L +++ L R+ +F + + ++ +R ++ S ++L +EME T++MLR
Sbjct: 484 LHMIMPLRGRAAIFARFAQHLKSICARGGDDLAVSLTIVLYSSEDEMENRETIEMLRASF 543
Query: 222 VTVTL 236
+ VT+
Sbjct: 544 IPVTV 548
>Z81131-5|CAB03422.2| 608|Caenorhabditis elegans Hypothetical
protein T24D1.1a protein.
Length = 608
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 51 LMLLLSLSTRSNLFLKTLANYRAFKSR---TMSKSALVILAQGAEEMETVITVDMLRRGG 221
L +++ L R+ +F + + ++ +R ++ S ++L +EME T++MLR
Sbjct: 358 LHMIMPLRGRAAIFARFAQHLKSICARGGDDLAVSLTIVLYSSEDEMENRETIEMLRASF 417
Query: 222 VTVTL 236
+ VT+
Sbjct: 418 IPVTV 422
>AY241925-2|AAO85273.1| 734|Caenorhabditis elegans chondroitin
disaccharide polymerase protein.
Length = 734
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 51 LMLLLSLSTRSNLFLKTLANYRAFKSR---TMSKSALVILAQGAEEMETVITVDMLRRGG 221
L +++ L R+ +F + + ++ +R ++ S ++L +EME T++MLR
Sbjct: 484 LHMIMPLRGRAAIFARFAQHLKSICARGGDDLAVSLTIVLYSSEDEMENRETIEMLRASF 543
Query: 222 VTVTL 236
+ VT+
Sbjct: 544 IPVTV 548
>AY241925-1|AAO85274.1| 736|Caenorhabditis elegans chondroitin
disaccharide polymerase protein.
Length = 736
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 51 LMLLLSLSTRSNLFLKTLANYRAFKSR---TMSKSALVILAQGAEEMETVITVDMLRRGG 221
L +++ L R+ +F + + ++ +R ++ S ++L +EME T++MLR
Sbjct: 486 LHMIMPLRGRAAIFARFAQHLKSICARGGDDLAVSLTIVLYSSEDEMENRETIEMLRASF 545
Query: 222 VTVTL 236
+ VT+
Sbjct: 546 IPVTV 550
>AB088398-1|BAC76781.1| 715|Caenorhabditis elegans chondroitin
synthase-S protein.
Length = 715
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 51 LMLLLSLSTRSNLFLKTLANYRAFKSR---TMSKSALVILAQGAEEMETVITVDMLRRGG 221
L +++ L R+ +F + + ++ +R ++ S ++L +EME T++MLR
Sbjct: 465 LHMIMPLRGRAAIFARFAQHLKSICARGGDDLAVSLTIVLYSSEDEMENRETIEMLRASF 524
Query: 222 VTVTL 236
+ VT+
Sbjct: 525 IPVTV 529
>AB088397-1|BAC76780.1| 726|Caenorhabditis elegans chondroitin
synthase protein.
Length = 726
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 51 LMLLLSLSTRSNLFLKTLANYRAFKSR---TMSKSALVILAQGAEEMETVITVDMLRRGG 221
L +++ L R+ +F + + ++ +R ++ S ++L +EME T++MLR
Sbjct: 476 LHMIMPLRGRAAIFARFAQHLKSICARGGDDLAVSLTIVLYSSEDEMENRETIEMLRASF 535
Query: 222 VTVTL 236
+ VT+
Sbjct: 536 IPVTV 540
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,389,574
Number of Sequences: 27780
Number of extensions: 237248
Number of successful extensions: 593
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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