Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H11
         (881 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075548-1|AAL68355.1|   73|Drosophila melanogaster RH49308p pro...    59   9e-09
AY061306-1|AAL28854.1|  743|Drosophila melanogaster LD22256p pro...    57   4e-08
AJ635208-1|CAG25590.1| 1153|Drosophila melanogaster CAP-G protei...    57   4e-08
AE013599-1638|AAS64861.1|  743|Drosophila melanogaster CG17054-P...    57   4e-08
AE013599-1634|AAF58425.4| 1153|Drosophila melanogaster CG17054-P...    57   4e-08
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.5  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.5  

>AY075548-1|AAL68355.1|   73|Drosophila melanogaster RH49308p
           protein.
          Length = 73

 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = +2

Query: 203 NHYRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 313
           N +RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 33  NAFRRNMNERFSRVMYQRDFRLTDNPYKMNGLDAIPD 69


>AY061306-1|AAL28854.1|  743|Drosophila melanogaster LD22256p
           protein.
          Length = 743

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = +2

Query: 209 YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 313
           +RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 705 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 739


>AJ635208-1|CAG25590.1| 1153|Drosophila melanogaster CAP-G protein
            protein.
          Length = 1153

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = +2

Query: 209  YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 313
            +RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 1115 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 1149


>AE013599-1638|AAS64861.1|  743|Drosophila melanogaster CG17054-PE,
           isoform E protein.
          Length = 743

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = +2

Query: 209 YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 313
           +RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 705 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 739


>AE013599-1634|AAF58425.4| 1153|Drosophila melanogaster CG17054-PA,
            isoform A protein.
          Length = 1153

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = +2

Query: 209  YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 313
            +RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 1115 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 1149


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 652 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 747
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 652 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 747
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,892,997
Number of Sequences: 53049
Number of extensions: 548988
Number of successful extensions: 1477
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)