Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H10
         (850 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0724 - 5415218-5415280,5415398-5415523,5415614-5415710,541...    31   1.2  
05_03_0512 + 14913356-14913769,14915907-14916032,14916129-149161...    29   3.5  
06_01_0314 + 2255908-2255979,2256354-2256512,2257021-2257209,225...    29   6.2  
06_01_0109 - 863806-864045,864448-864566,864680-864851,864914-86...    28   8.2  

>02_01_0724 -
           5415218-5415280,5415398-5415523,5415614-5415710,
           5415797-5415861,5415964-5416026,5416127-5416197,
           5416430-5416489,5416564-5416663,5416863-5416938,
           5417284-5417358,5417451-5417575,5417664-5417722,
           5418031-5418109,5418303-5418533
          Length = 429

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -2

Query: 507 IKQKENKTCKIYSKSNTSQRLW*EHQKACHHLVTGCAKR 391
           IK KE     + +KSN     W   Q+  HH V GC  R
Sbjct: 316 IKPKEQSEPSMVAKSNFKHLYWTLTQQLAHHTVNGCNLR 354


>05_03_0512 +
           14913356-14913769,14915907-14916032,14916129-14916185,
           14916950-14917027,14917681-14917773
          Length = 255

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 297 LYSILLQGDIDTIINLAPALKFNGGG 374
           L + + +GD   I++L  A+KFNGGG
Sbjct: 74  LDAAVAKGDAPAIVHLQSAIKFNGGG 99


>06_01_0314 +
           2255908-2255979,2256354-2256512,2257021-2257209,
           2257390-2257561,2257711-2257784,2257818-2257904,
           2257975-2257998,2258100-2258225
          Length = 300

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 348 PALKFNGGGHI-NHSIFWHNLSP-NGGKPSDVLTKAVEK 458
           P  ++N    + NH  FW ++ P  GG P   + + +EK
Sbjct: 131 PLPEYNNAAQVWNHHFFWESMQPEGGGSPGRGVLQQIEK 169


>06_01_0109 -
           863806-864045,864448-864566,864680-864851,864914-865108,
           865179-865388,865738-865926
          Length = 374

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 381 NHSIFWHNLSP-NGGKPSDVLTKAVEK 458
           NH  +W ++ P  GGKP + L K + +
Sbjct: 201 NHDFYWRSMQPGGGGKPPERLLKFINR 227


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,328,946
Number of Sequences: 37544
Number of extensions: 270961
Number of successful extensions: 510
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)