Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H10
         (850 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    25   0.67 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    25   0.67 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    25   0.67 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   2.7  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   3.6  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 417 HLVTGCAKRSSG*CDHH 367
           H VTGC +R+ G C H+
Sbjct: 128 HPVTGCGERTEGRCLHY 144


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 417 HLVTGCAKRSSG*CDHH 367
           H VTGC +R+ G C H+
Sbjct: 133 HPVTGCGERTEGRCLHY 149


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 417 HLVTGCAKRSSG*CDHH 367
           H VTGC +R+ G C H+
Sbjct: 133 HPVTGCGERTEGRCLHY 149


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 168 NTYSNLLRKLIFNVILILTLWVP 236
           N Y+N  +KL +N+I I  + VP
Sbjct: 345 NNYNNNCKKLYYNIINIEQIPVP 367


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 168 NTYSNLLRKLIFNVILILTLWVP 236
           N Y N  +KL +N+I I  + VP
Sbjct: 327 NNYKNYNKKLYYNIINIEQIPVP 349


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,572
Number of Sequences: 438
Number of extensions: 3094
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)