Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H08
         (948 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   1.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.9  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   3.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
 Frame = -3

Query: 676 GGGXXXXXXGX--GPXXXGXGGXXGXXGXXKXPPXXXXXGGGXGXGXG 539
           GGG      G   GP   G GG  G     +        GG  G G G
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGG 255



 Score = 23.8 bits (49), Expect(2) = 1.0
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 569 GGGXXGXXXGXXXGPRXGGXG 507
           GGG  G   G   GP  GG G
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGG 228



 Score = 21.0 bits (42), Expect(2) = 1.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 398 GXXGGGGGGXXXR 360
           G  GGGGGG   R
Sbjct: 223 GPGGGGGGGGRDR 235


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 21/87 (24%), Positives = 22/87 (25%), Gaps = 2/87 (2%)
 Frame = +1

Query: 367 LXPPPPPPXXPXXXXXFFXAXXXPXXXXXXXXPXX--GGGXXXXXXXXXPXPPXRGPXXX 540
           L PPPPPP  P            P        P                  P  + P   
Sbjct: 528 LGPPPPPP--PGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAP 585

Query: 541 PXXXPXXPPPXXXGGGXXXXPXXPXXP 621
           P   P  PPP    GG    P     P
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +2

Query: 788 PXXXXXXPPPXPPXXPPXXP 847
           P      PPP PP  PP  P
Sbjct: 574 PNLPNAQPPPAPPPPPPMGP 593



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 809 PPPXPPXXPPXXP 847
           PPP PP  PP  P
Sbjct: 585 PPPPPPMGPPPSP 597


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -2

Query: 398 GXXGGGGGGXXXRKXXGGGR 339
           G  G GGGG   R   GGGR
Sbjct: 60  GDDGYGGGGRGGRGGRGGGR 79


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 398 GXXGGGGGGXXXRKXXGGGRXTLEQXXRA 312
           G  GGGGGG       GG    ++Q  R+
Sbjct: 293 GGVGGGGGGGGGGGGGGGSAGPVQQPSRS 321



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 398 GXXGGGGGGXXXRKXXGGGRXTLEQ 324
           G  GGGGGG   R   G G    E+
Sbjct: 558 GIGGGGGGGGGGRAGGGVGATGAEK 582


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 398 GXXGGGGGGXXXRKXXGGGRXTLEQXXRA 312
           G  GGGGGG       GG    ++Q  R+
Sbjct: 293 GGVGGGGGGGGGGGGGGGSAGPVQQPSRS 321


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 398 GXXGGGGGGXXXRKXXGGGRXTLEQXXRA 312
           G  GGGGGG       GG    ++Q  R+
Sbjct: 245 GGVGGGGGGGGGGGGGGGSAGPVQQPSRS 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.155    0.569 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,057
Number of Sequences: 2352
Number of extensions: 6374
Number of successful extensions: 47
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103776201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)