Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_H06
(871 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 153 4e-36
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 123 7e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 6e-18
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 79 1e-13
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 68 4e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 61 3e-08
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 58 4e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 55 2e-06
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 50 1e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 42 0.027
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.047
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.082
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 36 1.8
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 4.1
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.4
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_Q72JY7 Cluster: AttH protein; n=2; Thermus thermophilus... 33 9.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 153 bits (372), Expect = 4e-36
Identities = 80/114 (70%), Positives = 84/114 (73%), Gaps = 6/114 (5%)
Frame = +1
Query: 475 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGKTRQDYKDTRRFPLEAPSCALLFRP 654
SK+ T R RFSIGSAPLTSITKIDAQVRGG+TRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 655 CRLPDTCPPFSLREAWRF--SH----SSRCRYLSSVXVLPXKXGXVCTNPPVQP 798
CRLPDTCPPFSLREAWRF +H S RCR + VCTNPP P
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWA-------VCTNPPFSP 108
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/66 (63%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Frame = +2
Query: 665 RIPVRLSPFGKRGA--FLIAHAVGISVRCXSFPXXLGLCAXTPPFSPTGAPYPVTIVLSP 838
R+P PF R A FLIAHAVGISVRC SF +C PPFSPT APYPVTIVLSP
Sbjct: 63 RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCT-NPPFSPTAAPYPVTIVLSP 121
Query: 839 XRLKTT 856
R TT
Sbjct: 122 TRKDTT 127
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 123 bits (296), Expect = 7e-27
Identities = 69/120 (57%), Positives = 79/120 (65%)
Frame = +1
Query: 307 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQXITQERTCEQKASKRP 486
R +C G +PLPRSLTR ARSFGCGERY+LT G T++ +++
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD----GDGNFLEDTRKTLSKEEI---- 77
Query: 487 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGKTRQDYKDTRRFPLEAPSCALLFRPCRLP 666
RPR RFSIGSAPLTSI K DAQ+ GG+TRQDYKD RRFPL APSCALLF P LP
Sbjct: 78 ----RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 93.5 bits (222), Expect = 6e-18
Identities = 44/54 (81%), Positives = 47/54 (87%)
Frame = +1
Query: 493 VKRPRCWRFSIGSAPLTSITKIDAQVRGGKTRQDYKDTRRFPLEAPSCALLFRP 654
V+ PR RFSIGSAPLTSITK DAQ+ GG+TRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 79.4 bits (187), Expect = 1e-13
Identities = 46/93 (49%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +2
Query: 596 IKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGAFLIAHAV--GISVRCXSFPXXLG 769
+KI VS LP ALSCS+PA RIPV PF G+ ++H+ GIS RC SF
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGSVALSHSSHSGISARCRSFAPSWA 89
Query: 770 LCAXTPPFSPTGAPYPVTIVLSPXRLKTTYRPG 868
+ + PPFSPT APYPVT+ LSP R T G
Sbjct: 90 V-SKNPPFSPTAAPYPVTVHLSPTRKSTQNATG 121
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 67.7 bits (158), Expect = 4e-10
Identities = 45/96 (46%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Frame = -1
Query: 862 AISRF*PGWTQDDSYRIRRTGRAERGGXCTQXQXXGEGXTPN*DTYSVSYEKSATLPEGR 683
A R PGWTQDDSYR R+ RAER G E P+ DT SVSYEK+ P+G+
Sbjct: 2 AFLRVRPGWTQDDSYRKGRSSRAER-GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60
Query: 682 KADRYPVSG-RVGTGERTRE-LPGGNAWYLYSPVGF 581
KA++ VSG R G R E G + SPVGF
Sbjct: 61 KAEQ--VSGKRQGRNRRAHEGAAGEKSPASLSPVGF 94
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -3
Query: 686 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVLPPLT 567
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 61.3 bits (142), Expect = 3e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = -2
Query: 483 PFAGLLLTCSFLRYXLILWITVLPPLSELIPLAAAERP 370
P LLTCSF Y LILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 3e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1
Query: 382 CGERYQLTQRR*YG--YPQNQXITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 555
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 556 IDAQVRGGKTRQDYKDTRRFPLEAPSCALLFRP 654
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 57.6 bits (133), Expect = 4e-07
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 784 PPVQPDRCALSGNYRLESXPVKNDLSP 864
PPVQPDRCALSGNYRLES PV++DLSP
Sbjct: 4 PPVQPDRCALSGNYRLESNPVRHDLSP 30
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 283 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQXITQ 450
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ Q + Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 633 VRSPVPTLPLTGYLSAFLPSGSVAL 707
+RSPVPTLPLTGYLSAFLPSGSVAL
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVAL 25
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 49.6 bits (113), Expect = 1e-04
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = -1
Query: 862 AISRF*PGWTQDDSYRIRRTGRAERGGXCTQXQXXGEGXTPN 737
A+ R PGWTQDDSYRIRR+GRAER G E TPN
Sbjct: 2 ALRRALPGWTQDDSYRIRRSGRAER-GVRAHSPAWSERPTPN 42
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 86 DPDMIRYIDEFGQTTTRMQ 142
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 402 HSKAVIRLSTESGDNAGKNM 461
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 41.5 bits (93), Expect = 0.027
Identities = 23/45 (51%), Positives = 26/45 (57%)
Frame = -1
Query: 862 AISRF*PGWTQDDSYRIRRTGRAERGGXCTQXQXXGEGXTPN*DT 728
A R PGWTQ +SYRIRR+ RAER G E TP+ DT
Sbjct: 2 AFYRAFPGWTQVNSYRIRRSSRAER-GVLAYSPAWSERPTPSRDT 45
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.047
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 281 SALMNRPTRGERRFAYW 331
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.082
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 353 ERGSGRAPNTQTASPRALADSLMQ 282
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 35.5 bits (78), Expect = 1.8
Identities = 30/110 (27%), Positives = 48/110 (43%)
Frame = -2
Query: 810 GAPVGLNGGVXAHXPXFXGKDXHRTEIPTA*AMRKAPRFPKGERRTGIR*AAGSEQESAR 631
G+ GG GK RT P++ ++ R ER G+ GS+Q S+
Sbjct: 534 GSGTWSRGGPPKKEELVGGKKKGRTWGPSSTLQKE--RVGGEERLKGL--GEGSKQWSSS 589
Query: 630 GSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 481
G++P + GFA+ + +F +A GG + +P + P Y S P
Sbjct: 590 APNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 34.3 bits (75), Expect = 4.1
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 492 GSWPFAGLLLTCSFLRYX---LILWITVLPPLSELIPLAAAERP 370
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 164 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 331
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.4
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 244 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 80
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q72JY7 Cluster: AttH protein; n=2; Thermus
thermophilus|Rep: AttH protein - Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039)
Length = 335
Score = 33.1 bits (72), Expect = 9.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 595 YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFSHSSRCR 729
Y++ F LEAP L FRP + P PP E R + S R
Sbjct: 134 YREGEGFRLEAPGVDLRFRPLKPPVVHPPSGTAETGRMHYQSYTR 178
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,713,254
Number of Sequences: 1657284
Number of extensions: 17359076
Number of successful extensions: 48574
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 45901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48537
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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