Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H05
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    40   0.016
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    40   0.016
AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.         31   5.6  
AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.         31   5.6  
AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.         31   5.6  
AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AF174600-1|AAF04521.1|  255|Homo sapiens F-box protein Fbx20 pro...    31   5.6  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 39.5 bits (88), Expect = 0.016
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
 Frame = -1

Query: 844 GGTQDDSTX*GAAXGLNGGFVHTAQL-GANDLHRTEIPTA*AMRKRHASRREKGGQVSGK 668
           GG+   S+  G+     GG     +L G     RT  P++  ++K      E+   + G 
Sbjct: 523 GGSSSGSSSGGSGTWSRGGPPKKEELVGGKKKGRTWGPSS-TLQKERVGGEER---LKGL 578

Query: 667 RQGRKQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 488
            +G KQ S+     G++P    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 579 GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 39.5 bits (88), Expect = 0.016
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
 Frame = -1

Query: 844 GGTQDDSTX*GAAXGLNGGFVHTAQL-GANDLHRTEIPTA*AMRKRHASRREKGGQVSGK 668
           GG+   S+  G+     GG     +L G     RT  P++  ++K      E+   + G 
Sbjct: 524 GGSSSGSSSGGSGTWSRGGPPKKEELVGGKKKGRTWGPSS-TLQKERVGGEER---LKGL 579

Query: 667 RQGRKQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 488
            +G KQ S+     G++P    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 580 GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639


>AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 591 PDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLREAWRFLI 722
           PDR   +P   PW LP  +     C L  TCP      + R L+
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILV 253


>AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 591 PDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLREAWRFLI 722
           PDR   +P   PW LP  +     C L  TCP      + R L+
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILV 253


>AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 591 PDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLREAWRFLI 722
           PDR   +P   PW LP  +     C L  TCP      + R L+
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILV 253


>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -1

Query: 550 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 434
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


>AF174600-1|AAF04521.1|  255|Homo sapiens F-box protein Fbx20
           protein.
          Length = 255

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 591 PDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLREAWRFLI 722
           PDR   +P   PW LP  +     C L  TCP      + R L+
Sbjct: 84  PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILV 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,146,823
Number of Sequences: 237096
Number of extensions: 2899687
Number of successful extensions: 12593
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12589
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)