Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H04
         (905 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   0.16 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    28   0.34 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.59 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.59 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.78 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   2.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   7.3  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect(2) = 0.75
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 622 PPPPPPXFXXGGGXKXXPPPPP 687
           P P    F  G G    PPPPP
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPP 790



 Score = 24.6 bits (51), Expect(2) = 0.16
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 580 PRGXKKXFFXGXXFPPPPPP 639
           P   +  F  G   PPPPPP
Sbjct: 769 PSPSRSAFADGIGSPPPPPP 788



 Score = 23.0 bits (47), Expect(2) = 0.16
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 622 PPPPPPXFXXGGG 660
           PPPPPP     GG
Sbjct: 786 PPPPPPSSLSPGG 798



 Score = 20.6 bits (41), Expect(2) = 0.75
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +1

Query: 778 PPPPXXKFXGGGFP 819
           PPPP      GG P
Sbjct: 787 PPPPPSSLSPGGVP 800


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 28.3 bits (60), Expect = 0.34
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = -3

Query: 426 GGGGXXFXGGGXXGXXXXXGGPXXXGGGXFFLGGXXXXXGGG 301
           GGGG    GG   G     G     GGG F  GG     G G
Sbjct: 65  GGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDG 106



 Score = 26.2 bits (55), Expect = 1.4
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = -3

Query: 423 GGGXXFXGGGXXGXXXXXGGPXXXGGGXFFLGGXXXXXGGG 301
           GGG    GGG  G     GG    G G     G     GGG
Sbjct: 58  GGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 17/63 (26%), Positives = 17/63 (26%)
 Frame = +2

Query: 302 PPPXXXXXPPKKXXPPPXXXGPPFXXXXPIXPPPKXXXPPPPKXXXXGXKXGGGXXXPXX 481
           PPP      P     P     P      P   PP    PPPP         GG    P  
Sbjct: 549 PPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAG 608

Query: 482 XPP 490
             P
Sbjct: 609 SRP 611



 Score = 25.8 bits (54), Expect = 1.8
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
 Frame = +1

Query: 610 GXXFPPPPPPXFXXGGGXKXXPP---PPP 687
           G   PPPPPP    GG     PP   PPP
Sbjct: 526 GPLGPPPPPP---PGGAVLNIPPQFLPPP 551



 Score = 25.8 bits (54), Expect = 1.8
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = +3

Query: 306 PPXXXXXPPKKXPPPPXXXGPXFXGXXXXXPP 401
           PP     PP   PPP    G    G     PP
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 426 GGGGXXFXGGGXXGXXXXXGGPXXXGGG 343
           G GG    GG   G     GGP   GGG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 24.6 bits (51), Expect = 4.2
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = -2

Query: 424 GGGXXXFXGGXNXXXPXKXGPXXXGGGGXFFGG 326
           GGG        N   P   G    GGGG   GG
Sbjct: 144 GGGSGAIHASPNAQNPSSGGRSSSGGGGGGGGG 176



 Score = 23.8 bits (49), Expect = 7.3
 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = -2

Query: 442 PGXXFGG-GGXXXFXGGXNXXXPXKXGPXXXGGGG 341
           PG   GG GG     GG +   P   GP   GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGP---GPGGGGGGG 231


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 23/97 (23%), Positives = 26/97 (26%), Gaps = 3/97 (3%)
 Frame = +2

Query: 302 PPPXXXXXPPKKXXPPPXXXG---PPFXXXXPIXPPPKXXXPPPPKXXXXGXKXGGGXXX 472
           PP       P     PP   G   PP     P   PP     P P+         GG   
Sbjct: 233 PPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPS 292

Query: 473 PXXXPPXGGXXXFXKXXXXPPXSPXXNFXXKXPKKNP 583
               PP             PP     NF  + P  +P
Sbjct: 293 GMVGPPRPPMPMQGGAPGGPPQGMRPNFYNR-PMGDP 328


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/41 (29%), Positives = 13/41 (31%)
 Frame = +2

Query: 302 PPPXXXXXPPKKXXPPPXXXGPPFXXXXPIXPPPKXXXPPP 424
           P P     PP    PP     P      P+   P    PPP
Sbjct: 72  PKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPP 112



 Score = 24.6 bits (51), Expect = 4.2
 Identities = 17/60 (28%), Positives = 17/60 (28%), Gaps = 2/60 (3%)
 Frame = +3

Query: 303 PPPXXXXXPPKKXPPPPXXXGPXFXGXXXXXPPXKXXXPPPPKXXP--GXXXXGGGXXXP 476
           PPP     P     P      P   G     PP      PPP   P  G    G G   P
Sbjct: 79  PPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPPMGLGMRPP 138


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = -3

Query: 426 GGGGXXFXGGGXXGXXXXXGGPXXXGGGXFFLGG 325
           G  G  + G G  G     GG    GGG    GG
Sbjct: 541 GSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = -3

Query: 426 GGGGXXFXGGGXXGXXXXXGGPXXXGGG 343
           GGGG    GGG  G           GGG
Sbjct: 654 GGGGGGGGGGGSVGSGGIGSSSLGGGGG 681



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 15/42 (35%), Positives = 15/42 (35%)
 Frame = -3

Query: 426 GGGGXXFXGGGXXGXXXXXGGPXXXGGGXFFLGGXXXXXGGG 301
           GGGG    GGG        G     GGG    G      GGG
Sbjct: 653 GGGGGGGGGGGGSVGSGGIGSSSLGGGG----GSGRSSSGGG 690


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,893
Number of Sequences: 2352
Number of extensions: 11639
Number of successful extensions: 80
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)