Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H02
         (892 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   4.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.8  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 743 KGVRYKQNN-FTYREDLLNSPKNIQIYKLLALLCDGIKSEKSN 618
           KG   + N  F YR  +L++ +N    + +  + DG+ + K N
Sbjct: 228 KGATVQDNPIFPYRGIMLDTARNYMSVESIRRVLDGMAANKLN 270


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 561 FIRTQTKSPCSLWSSHFT 508
           F+   + +P  LW+SH T
Sbjct: 425 FVARNSDTPIILWTSHLT 442


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 343 YRSSRGHHEHPDTVPP 390
           Y SS+ HH H    PP
Sbjct: 48  YASSQHHHHHLQARPP 63


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 688 HPKTFKFTNYWLSSVTVLSLKNLT 617
           HP   K  +Y   +VT  +L+NLT
Sbjct: 439 HPVYHKDPHYGFHNVTNTTLQNLT 462


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +3

Query: 591 TLLDYRKILVRFFRLNTVTEESQ*FVNLNVF 683
           T+L+Y++     +R+     +S    N+N+F
Sbjct: 303 TILEYKRTKKLLYRIPVTKTDSMLIRNINLF 333


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +3

Query: 591 TLLDYRKILVRFFRLNTVTEESQ*FVNLNVF 683
           T+L+Y++     +R+     +S    N+N+F
Sbjct: 128 TILEYKRTKKLLYRIPVTKTDSMLIRNINLF 158


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -1

Query: 346 CIYAIDVVQWCKLQADCGVCVS 281
           C   I  V WC+L  D    VS
Sbjct: 319 CYSTIGTVSWCELNFDWSSQVS 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,081
Number of Sequences: 336
Number of extensions: 4451
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)