Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_H02
         (892 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   4.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.4  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   5.4  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   7.1  
AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding pr...    23   9.4  
AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding pr...    23   9.4  
AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding pr...    23   9.4  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 292 RHNRPAVYTIAQHRSHKYRSSRGHHEHP 375
           +  +P+ Y   QH  H       HH HP
Sbjct: 165 QQQQPSSYHQQQHPGHSQHHHHHHHHHP 192


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 580 YLDQFSVYKNAN*VAMFTLELPL 512
           +LD F  Y N   VA+FT+E+ L
Sbjct: 512 WLDDFQEYTNMFFVALFTMEMLL 534


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 691 THPKTFKFTNYWLSSVTVLSLKNLTKIFL*SNKVGKYYLD 572
           T P+++KF + WL   T    +    I   S+ V  Y LD
Sbjct: 175 TLPESWKFNSTWLGLATTYGTEQSAIIERSSDVVSVYMLD 214


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 691 THPKTFKFTNYWLSSVTVLSLKNLTKIFL*SNKVGKYYLD 572
           T P+++KF + WL   T    +    I   S+ V  Y LD
Sbjct: 175 TLPESWKFNSTWLGLATTYGTEQSAIIERSSDVVSVYMLD 214


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +1

Query: 328 HRSHKYRSSRGHHEHPDTVPPAG 396
           H +H +     HH HP     AG
Sbjct: 498 HHAHPHHHHHHHHHHPTAADLAG 520


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 358 PVNFCIYAIDVVQWCKLQADCGVCVSLQYTM 266
           PV F I   +++ WC L     VC  +  TM
Sbjct: 536 PVIFAI-CFNILNWCMLVRSSNVCPYVSSTM 565


>AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding
           protein AgamOBP30 protein.
          Length = 289

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 280 LQYTMTGRLFASAHRHVVDCR*FGPAILEEFSLSTG 173
           LQY M  R F+ A  HV         +L  + L TG
Sbjct: 186 LQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTG 221


>AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding
           protein OBPjj83c protein.
          Length = 273

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 280 LQYTMTGRLFASAHRHVVDCR*FGPAILEEFSLSTG 173
           LQY M  R F+ A  HV         +L  + L TG
Sbjct: 170 LQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTG 205


>AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 289

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 280 LQYTMTGRLFASAHRHVVDCR*FGPAILEEFSLSTG 173
           LQY M  R F+ A  HV         +L  + L TG
Sbjct: 186 LQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTG 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,747
Number of Sequences: 2352
Number of extensions: 18586
Number of successful extensions: 36
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)