Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_G18
         (1420 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    32   1.7  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    31   5.1  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
            protein.
          Length = 926

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 19/65 (29%), Positives = 22/65 (33%)
 Frame = +1

Query: 1081 PPXXXPSPSSTXXLSVXXXPXXXPPXASXXLLFPQXXLPPPXXRXXAXXPXLTFXISRRP 1260
            PP   P P  T   +V   P   PP        P   LPPP  R     P  T   ++ P
Sbjct: 380  PPTNKPLPPVTVRTTVRTTPRPTPPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPP 439

Query: 1261 LHXXP 1275
                P
Sbjct: 440  TTYLP 444


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 17/65 (26%), Positives = 23/65 (35%)
 Frame = +1

Query: 1009  ILFIXSFXXLXPXXPSPXXXXXXXPPXXXPSPSSTXXLSVXXXPXXXPPXASXXLLFPQX 1188
             I+ I S     P  PSP        P   P+  S   +++   P   P      +  PQ 
Sbjct: 19382 IVNIPSIPQPTPQRPSPGIINVPSVPQPIPTAPSPGIINIPSVPQPLPSPTPGVINIPQQ 19441

Query: 1189  XLPPP 1203
               PPP
Sbjct: 19442 PTPPP 19446


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,959,129
Number of Sequences: 53049
Number of extensions: 249598
Number of successful extensions: 507
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7802901504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)