Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_G15
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 31 5.7
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 31 5.7
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 7.5
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 7.5
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 7.5
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 7.5
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 7.5
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 7.5
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 7.5
X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein. 30 10.0
L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein. 30 10.0
AF508785-1|AAM34265.1| 880|Homo sapiens GAS2-related protein is... 30 10.0
AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein. 30 10.0
AB177802-1|BAD16738.1| 1365|Homo sapiens fibrillin 1 protein. 30 10.0
AB177801-1|BAD16737.1| 195|Homo sapiens fibrillin 1 protein. 30 10.0
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = -2
Query: 697 DRYXGKRQGRNRRAHEGAFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRP 518
+R G +G + + G++P + GFA+ + +F +A GG + +P + P
Sbjct: 573 ERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTP 632
Query: 517 FYGSWP 500
Y S P
Sbjct: 633 SYLSVP 638
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = -2
Query: 697 DRYXGKRQGRNRRAHEGAFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRP 518
+R G +G + + G++P + GFA+ + +F +A GG + +P + P
Sbjct: 574 ERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTP 633
Query: 517 FYGSWP 500
Y S P
Sbjct: 634 SYLSVP 639
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.5
Identities = 28/101 (27%), Positives = 40/101 (39%)
Frame = +1
Query: 544 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRXTCPPFSPSGSV 723
R R P + R S R +P RY PP P+ + S P + P SP
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP---PKRRTASPPPPPKRRASP-SPPPKR 633
Query: 724 ALSHSSRCRYLSSGVGRSLQAGLCARTPRSARPVRLIRYYR 846
+SHS + SS V + L ++ + + P R R R
Sbjct: 634 RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREAR 674
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.5
Identities = 28/101 (27%), Positives = 40/101 (39%)
Frame = +1
Query: 544 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRXTCPPFSPSGSV 723
R R P + R S R +P RY PP P+ + S P + P SP
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP---PKRRTASPPPPPKRRASP-SPPPKR 633
Query: 724 ALSHSSRCRYLSSGVGRSLQAGLCARTPRSARPVRLIRYYR 846
+SHS + SS V + L ++ + + P R R R
Sbjct: 634 RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREAR 674
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 7.5
Identities = 28/101 (27%), Positives = 40/101 (39%)
Frame = +1
Query: 544 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRXTCPPFSPSGSV 723
R R P + R S R +P RY PP P+ + S P + P SP
Sbjct: 587 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP---PKRRTASPPPPPKRRASP-SPPPKR 642
Query: 724 ALSHSSRCRYLSSGVGRSLQAGLCARTPRSARPVRLIRYYR 846
+SHS + SS V + L ++ + + P R R R
Sbjct: 643 RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREAR 683
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.5
Identities = 28/101 (27%), Positives = 40/101 (39%)
Frame = +1
Query: 544 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRXTCPPFSPSGSV 723
R R P + R S R +P RY PP P+ + S P + P SP
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP---PKRRTASPPPPPKRRASP-SPPPKR 633
Query: 724 ALSHSSRCRYLSSGVGRSLQAGLCARTPRSARPVRLIRYYR 846
+SHS + SS V + L ++ + + P R R R
Sbjct: 634 RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREAR 674
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 7.5
Identities = 28/101 (27%), Positives = 40/101 (39%)
Frame = +1
Query: 544 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRXTCPPFSPSGSV 723
R R P + R S R +P RY PP P+ + S P + P SP
Sbjct: 587 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP---PKRRTASPPPPPKRRASP-SPPPKR 642
Query: 724 ALSHSSRCRYLSSGVGRSLQAGLCARTPRSARPVRLIRYYR 846
+SHS + SS V + L ++ + + P R R R
Sbjct: 643 RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREAR 683
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 7.5
Identities = 28/101 (27%), Positives = 40/101 (39%)
Frame = +1
Query: 544 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRXTCPPFSPSGSV 723
R R P + R S R +P RY PP P+ + S P + P SP
Sbjct: 576 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP---PKRRTASPPPPPKRRASP-SPPPKR 631
Query: 724 ALSHSSRCRYLSSGVGRSLQAGLCARTPRSARPVRLIRYYR 846
+SHS + SS V + L ++ + + P R R R
Sbjct: 632 RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREAR 672
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 7.5
Identities = 28/101 (27%), Positives = 40/101 (39%)
Frame = +1
Query: 544 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRXTCPPFSPSGSV 723
R R P + R S R +P RY PP P+ + S P + P SP
Sbjct: 576 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP---PKRRTASPPPPPKRRASP-SPPPKR 631
Query: 724 ALSHSSRCRYLSSGVGRSLQAGLCARTPRSARPVRLIRYYR 846
+SHS + SS V + L ++ + + P R R R
Sbjct: 632 RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREAR 672
>X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.
Length = 3002
Score = 30.3 bits (65), Expect = 10.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 888 CCXGDKSXLPGGLKTIVPDKAHRSG*TGGSCTQPSL 781
CC G K+ LPGG + IVP H G G C++P++
Sbjct: 198 CCPGWKT-LPGGNQCIVPICRHSCG--DGFCSRPNM 230
>L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.
Length = 2871
Score = 30.3 bits (65), Expect = 10.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 888 CCXGDKSXLPGGLKTIVPDKAHRSG*TGGSCTQPSL 781
CC G K+ LPGG + IVP H G G C++P++
Sbjct: 67 CCPGWKT-LPGGNQCIVPICRHSCG--DGFCSRPNM 99
>AF508785-1|AAM34265.1| 880|Homo sapiens GAS2-related protein
isoform beta protein.
Length = 880
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 641 ESSLVRSPVPTLPLTGIPVRLSPLR 715
E VRSP P LT IP+RL P R
Sbjct: 487 EPESVRSPTPVQGLTKIPIRLPPAR 511
>AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.
Length = 2871
Score = 30.3 bits (65), Expect = 10.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 888 CCXGDKSXLPGGLKTIVPDKAHRSG*TGGSCTQPSL 781
CC G K+ LPGG + IVP H G G C++P++
Sbjct: 67 CCPGWKT-LPGGNQCIVPICRHSCG--DGFCSRPNM 99
>AB177802-1|BAD16738.1| 1365|Homo sapiens fibrillin 1 protein.
Length = 1365
Score = 30.3 bits (65), Expect = 10.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 888 CCXGDKSXLPGGLKTIVPDKAHRSG*TGGSCTQPSL 781
CC G K+ LPGG + IVP H G G C++P++
Sbjct: 67 CCPGWKT-LPGGNQCIVPICRHSCG--DGFCSRPNM 99
>AB177801-1|BAD16737.1| 195|Homo sapiens fibrillin 1 protein.
Length = 195
Score = 30.3 bits (65), Expect = 10.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 888 CCXGDKSXLPGGLKTIVPDKAHRSG*TGGSCTQPSL 781
CC G K+ LPGG + IVP H G G C++P++
Sbjct: 67 CCPGWKT-LPGGNQCIVPICRHSCG--DGFCSRPNM 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,948,404
Number of Sequences: 237096
Number of extensions: 2857862
Number of successful extensions: 8331
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8325
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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