Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_G14
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 138 3e-33
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 52 7e-07
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 3e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 48 6e-06
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 48 6e-06
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 48 8e-06
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 45 8e-05
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 44 1e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 44 1e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 44 1e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 44 1e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 44 1e-04
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 44 1e-04
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 44 2e-04
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 44 2e-04
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 44 2e-04
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 44 2e-04
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 44 2e-04
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 44 2e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 43 2e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 43 2e-04
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 43 2e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 42 6e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 40 0.002
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 39 0.004
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 39 0.004
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 39 0.004
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 39 0.004
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 39 0.005
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 39 0.005
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 38 0.009
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 38 0.009
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 38 0.009
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 38 0.009
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 38 0.009
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 37 0.016
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 37 0.016
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 37 0.021
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 37 0.021
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 37 0.021
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 37 0.021
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.028
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.028
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 36 0.028
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 35 0.064
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 35 0.064
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 35 0.064
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 35 0.064
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 35 0.084
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.084
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.084
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 34 0.15
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 34 0.15
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 34 0.15
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 34 0.15
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 33 0.34
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 33 0.34
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 33 0.34
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 33 0.34
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 33 0.34
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 33 0.34
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 33 0.34
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 33 0.34
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 33 0.34
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 30 2.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 4.2
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 5.5
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 5.5
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 5.5
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 29 5.5
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 5.5
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 5.5
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 5.5
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 5.5
Z73911-3|CAC42339.1| 324|Caenorhabditis elegans Hypothetical pr... 28 9.7
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 138 bits (335), Expect = 3e-33
Identities = 62/94 (65%), Positives = 75/94 (79%), Gaps = 4/94 (4%)
Frame = +2
Query: 320 MNPMTNVKNVLKLSERELG----SSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQ 487
MNP+TN+KN +++EREL K SWH YKDSAWI++GGL Y L+EGDVI VFSQ
Sbjct: 1 MNPITNIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 488 YGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTTL 589
YGE++NIN++RDK TGK KGFAFLCY+DQRST L
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTIL 94
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/69 (40%), Positives = 35/69 (50%)
Frame = +3
Query: 525 KQPGNQKDLHFCAMRIKDQQL*XVDNLNGIKILGRTLRVDHCEQYKVPNADMSXIDEVTA 704
K G K F + + + VDN NGI + R +RVDH E+YKVP DE T
Sbjct: 73 KDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDHVEEYKVPKYKEDADDE-TK 131
Query: 705 AIRMEGCAP 731
+ EGCAP
Sbjct: 132 RLWEEGCAP 140
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +2
Query: 410 KDSAWIFVGGLPYDLTEGDVICVFS-QYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
KD A IFVG LP+++TE +I FS Q G + + +VRDK TGK KGFAF+ ++ S +
Sbjct: 244 KDMA-IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Query: 587 L 589
L
Sbjct: 303 L 303
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINM 514
+FVG +P + E V +FS +G I ++ M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 56.0 bits (129), Expect = 3e-08
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYED 571
+FVG + YD++E + +FS+ G +++I MV D+ TGKPKG+ F+ + D
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPD 68
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 51.6 bits (118), Expect = 7e-07
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTTLXS*QF 604
++VG P+ TE D+ FSQ G + N+ +V D+ TG+P+GFAF+ + ++ + QF
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 380 SSKTSWHDQYKDSAWI-FVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAF 556
SS TS Q WI FV + + TE DV FS+YG+I NI++ D+ TG KG+A
Sbjct: 41 SSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYAL 100
Query: 557 LCYEDQR 577
+ YE Q+
Sbjct: 101 VEYETQK 107
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
++VG P+ TE ++ FS G+I N+ +V D+ TG+P+GFAF+ + ++ S
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGS 58
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 48.4 bits (110), Expect = 6e-06
Identities = 18/50 (36%), Positives = 34/50 (68%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
++VG +PY TE ++ F+ G + N+ +V D+ TG+P+GFAF+ + ++
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +2
Query: 410 KDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTTL 589
+++ +FVGGLP D +E D+ F Q+G++ +I DK T + FAF+ +E++ S
Sbjct: 107 RENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADK 166
Query: 590 XS*Q 601
S Q
Sbjct: 167 ASSQ 170
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 559
IFVGG+ ++ D+ F+QYGE+ + D+T G+ +GFAF+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFV 75
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +2
Query: 410 KDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTTL 589
+++ +FVGGLP D +E D+ F Q+G++ +I DK T + FAF+ +E++ S
Sbjct: 107 RENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADK 166
Query: 590 XS*Q 601
S Q
Sbjct: 167 ASSQ 170
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 559
IFVGG+ ++ D+ F+QYGE+ + D+T G+ +GFAF+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFV 75
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
D+ +FVG +P +L E D+ +F Q+G+I +++DK TG KG AFL Y
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
D +F+G L +E +V +F+ +GE+ + ++R G KG AF+ Y+
Sbjct: 122 DDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADGASKGCAFVKYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
D+ +FVG +P +L E D+ +F Q+G+I +++DK TG KG AFL Y
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
D +F+G L +E +V +F+ +GE+ + ++R G KG AF+ Y+
Sbjct: 122 DDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADGASKGCAFVKYK 172
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2
Query: 431 VGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
V LP ++ E ++ +F + G ++ I + RDK TG PKGFAF+ +E +
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESR 227
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
+FVG + Y+ +E + F YG+I + MV D+ GKP+G+AF+ Y D+
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDE-AGKPRGYAFIEYSDK 154
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
D A +F+ LP D + D+I F+ +G I++ + DK T K F F+ YE+ +S T
Sbjct: 333 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 390
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
D A +F+ LP D + D+I F+ +G I++ + DK T K F F+ YE+ +S T
Sbjct: 497 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 554
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +2
Query: 305 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 484
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 485 QYGEIVNINMVRDKTTGKPKGFAFLCY 565
+YG + + N++RDK+T KG F+ +
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNR 192
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
D A +F+ LP D + D+I F+ +G I++ + DK T K F F+ YE+ +S T
Sbjct: 497 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 554
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +2
Query: 305 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 484
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 485 QYGEIVNINMVRDKTTGKPKGFAFLCY 565
+YG + + N++RDK+T KG F+ +
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNR 192
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
D A +F+ LP D + D+I F+ +G I++ + DK T K F F+ YE+ +S T
Sbjct: 426 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 483
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +2
Query: 305 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 484
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 485 QYGEIVNINMVRDKTTGKPKGFAFLCY 565
+YG + + N++RDK+T KG F+ +
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNR 192
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
D A +F+ LP D + D+I F+ +G I++ + DK T K F F+ YE+ +S T
Sbjct: 497 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 554
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +2
Query: 305 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 484
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 485 QYGEIVNINMVRDKTTGKPKGFAFLCY 565
+YG + + N++RDK+T KG F+ +
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNR 192
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
IFVGGLPY ++ + F Q+G+I ++ D+ T K +G+ F+ +D+ S
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRAS 88
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 398 HDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
HD +F+GGL +D T+ + FSQ+G +V+ ++RD T +GF F+ +
Sbjct: 42 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 97
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 398 HDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
HD +F+GGL +D T+ + FSQ+G +V+ ++RD T +GF F+ +
Sbjct: 62 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 117
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 398 HDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
HD +F+GGL +D T+ + FSQ+G +V+ ++RD T +GF F+ +
Sbjct: 63 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 559
+F+ LPY E D+ +F +YGE+ + +V DK TG KGFA +
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIV 325
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 380 SSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVF-SQYGEIVNINMVRDK 526
SSK + + + +FV L +D T+G + +F +YG++V + K
Sbjct: 628 SSKKQSEKEIESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKK 677
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
IFVGGL + T+ + +SQ+GEI +I ++RD TT + +GF F+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
++V G+ D TE + F++YG + ++ DK T KP+GF F+ ++D S
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
++V G+ D TE + F++YG + ++ DK T KP+GF F+ ++D S
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 129
Score = 34.7 bits (76), Expect = 0.084
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 479 FSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
+SQ+GEI +I ++RD TT + +GF F+ +
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTF 33
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
++V G+ D TE + F++YG + ++ DK T KP+GF F+ ++D S
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 129
Score = 34.7 bits (76), Expect = 0.084
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 479 FSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
+SQ+GEI +I ++RD TT + +GF F+ +
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTF 33
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
IFVGGL + T+ + +SQ+GEI +I ++RD TT + +GF F+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
++V G+ D TE + F++YG + ++ DK T KP+GF F+ ++D S
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
IFVGGL + T+ + +SQ+GEI +I ++RD TT + +GF F+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
++V G+ D TE + F++YG + ++ DK T KP+GF F+ ++D S
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +2
Query: 305 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 484
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 485 QYGEIVNINMVRDKTTGKPKGFAFLCY 565
+YG + + N++RDK+T KG F+ +
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNR 192
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +2
Query: 305 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 484
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 485 QYGEIVNINMVRDKTTGKPKGFAFLCY 565
+YG + + N++RDK+T KG F+ +
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNR 192
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +2
Query: 305 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 484
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 485 QYGEIVNINMVRDKTTGKPKGFAFLCY 565
+YG + + N++RDK+T KG F+ +
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTF 103
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +2
Query: 344 NVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRD 523
N L+L + + S +DQ K S ++V G+P +T ++ +F +G+I+ ++ D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSN-LYVSGIPKSMTLHELESIFRPFGQIITSRILSD 162
Query: 524 KTTGKPKGFAFLCYE 568
TG KG F+ ++
Sbjct: 163 NVTGLSKGVGFVRFD 177
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
+ + LP +T+ +V +F+ GEI + +VRDK TG+ G+ F+ Y
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNY 90
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 559
+FV L D + + +FSQ+G IVN+ ++RD T + KG+AF+
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFV 419
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 362 ERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKP 541
E L + S H +D +F+GGL + T ++ F ++GE+ ++RD T +
Sbjct: 27 EARLNADSDDGSHGS-QDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRA 85
Query: 542 KGFAFLCYEDQRS 580
+GF F+ + D S
Sbjct: 86 RGFGFITFVDPSS 98
Score = 35.9 bits (79), Expect = 0.037
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
+F+GGL T D+ F YG++ + ++ DK T + +GF F+ ++
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFD 183
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 362 ERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKP 541
E L + S H +D +F+GGL + T ++ F ++GE+ ++RD T +
Sbjct: 27 EARLNADSDDGSHGS-QDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRA 85
Query: 542 KGFAFLCYEDQRS 580
+GF F+ + D S
Sbjct: 86 RGFGFITFVDPSS 98
Score = 35.9 bits (79), Expect = 0.037
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
+F+GGL T D+ F YG++ + ++ DK T + +GF F+ ++
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFD 183
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +2
Query: 338 VKNVLKLSERELGSSSKTSWHDQYKD-SAWIFVGGLPYDLTEGDVICVFSQYGEIVNI-N 511
+ N++KL + + +K S H++ D A IFVG L ++ E + FS +G I+ +
Sbjct: 73 ILNMIKLYGKPI-KVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPK 131
Query: 512 MVRDKTTGKPKGFAFL 559
++RD +G KGFAF+
Sbjct: 132 IMRDVDSGTSKGFAFI 147
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2
Query: 419 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 559
A I+VGGL ++E + + Q G +V++NM +D+ T +GF F+
Sbjct: 13 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFV 59
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +2
Query: 338 VKNVLKLSERELGSSSKTSWHDQYKD-SAWIFVGGLPYDLTEGDVICVFSQYGEIVNI-N 511
+ N++KL + + +K S H++ D A IFVG L ++ E + FS +G I+ +
Sbjct: 83 ILNMIKLYGKPI-KVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPK 141
Query: 512 MVRDKTTGKPKGFAFL 559
++RD +G KGFAF+
Sbjct: 142 IMRDVDSGTSKGFAFI 157
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2
Query: 419 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 559
A I+VGGL ++E + + Q G +V++NM +D+ T +GF F+
Sbjct: 23 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFV 69
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
++VGG D+TE ++ F +G++V I++ D +GK +GF F+ ++
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 419 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
A ++VGGLP D T ++ +F ++G I + + R +P GFAF+ Y+D R
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVR 50
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 419 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
A ++VGGLP D T ++ +F ++G I + + R +P GFAF+ Y+D R
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVR 50
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 419 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
A ++VGGLP D T ++ +F ++G I + + R +P GFAF+ Y+D R
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVR 50
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/47 (31%), Positives = 31/47 (65%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
I+VG +P D+ E ++ +F + G+I ++ ++ D +G +G+AF+ Y
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTY 248
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
I+VG + +++ E + F +G I +INM D TG K FAF+ YE
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
++V + DL+E D+ VF +GEIV + R T +GF +L + + S
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTS 260
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
I+VG + +++ E + F +G I +INM D TG K FAF+ YE
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
++V + DL+E D+ VF +GEIV + R T +GF +L + + S
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTS 260
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
I+VG + +++ E + F +G I +INM D TG K FAF+ YE
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
++V + DL+E D+ VF +GEIV + R T +GF +L + + S
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTS 260
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 431 VGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
+ L Y T D+ F +YG+I ++++ RDK + + KGF F+ + ++R
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERR 71
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 431 VGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
+ L Y T D+ F +YG+I ++++ RDK + + KGF F+ + ++R
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERR 71
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
+FVG L D++ + F+++GE+ ++RD T K KG+ F+ + ++++
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQN 188
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
D+ ++VG + T+ D+ +FS YG+I + + K + +AF+ YE + T
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECAT 286
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = +2
Query: 317 IMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGE 496
I N M N+ S+ S T D+ ++VG + Y T ++ F G
Sbjct: 44 IQNEMVGHMNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGS 103
Query: 497 IVNINMVRDKTTGKPKGFAFLCYEDQ 574
+ + + D+ +G PKGFA++ + ++
Sbjct: 104 VSRVTIQCDRFSGHPKGFAYVEFTEK 129
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
+FV L + + +FS++GEI + ++ D GKPKGF F+ + DQ
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQ 288
Score = 34.7 bits (76), Expect = 0.084
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
++V + DL + + FS +G I + ++ D+ G+ KGF F+C+E T
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEEAT 397
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +2
Query: 419 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
A +++G L D++E + FS G +++I + RD T+ G+A++ ++
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
+FV L + + +FS++GEI + ++ D GKPKGF F+ + DQ
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQ 288
Score = 34.7 bits (76), Expect = 0.084
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
++V + DL + + FS +G I + ++ D+ G+ KGF F+C+E T
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEEAT 397
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +2
Query: 419 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
A +++G L D++E + FS G +++I + RD T+ G+A++ ++
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
+F+GGLP +T ++ +FS++G ++ + + D+ G PKG A + +E
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 368
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
+F+GGLP +T ++ +FS++G ++ + + D+ G PKG A + +E
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 368
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
+F+GGLP +T ++ +FS++G ++ + + D+ G PKG A + +E
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 154
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
+F+GGLP +T ++ +FS++G ++ + + D+ G PKG A + +E
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 368
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
D+ +F+G + ++ T ++ F G+IV + +DK T K K FA++ ++D S
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSS 108
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +2
Query: 350 LKLSERELGSSSK----TSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMV 517
++L ++ L +S K T+ + D+ ++VG + + T ++ F+ G++ + +
Sbjct: 19 MELLKQALSASKKYMAPTAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIP 78
Query: 518 RDKTTGKPKGFAFLCYEDQRSTTL 589
+DK TG K FAF+ ++ S L
Sbjct: 79 KDKFTGYQKNFAFVEFQKLESVQL 102
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 36.7 bits (81), Expect = 0.021
Identities = 12/45 (26%), Positives = 30/45 (66%)
Frame = +2
Query: 440 LPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
+P+ E +++ F Q+G ++ I + R++ TG KG+A++ ++++
Sbjct: 39 IPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNK 83
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 413 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
D+ +F+G + ++ T +V F G IV + +DK T K K FA++ ++D S
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSS 114
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
++VG LP D+ E +V +F +YG I + D +G+ FAF+ +ED R
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHR 57
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
++VG LP D+ E +V +F +YG I + D +G+ FAF+ +ED R
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHR 57
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.3 bits (80), Expect = 0.028
Identities = 17/52 (32%), Positives = 33/52 (63%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
+FV L T+ D+ +FS++G+I N +VRD+ +G +AF+ +++ +S
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 294
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Frame = +2
Query: 428 FVGGLPYDLTEGDV-----ICVFS-QYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
F+GGLPYD D+ C F+ + + +I++V D+ +G KGFA++ +E+++
Sbjct: 9 FIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQ 64
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.3 bits (80), Expect = 0.028
Identities = 17/52 (32%), Positives = 33/52 (63%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
+FV L T+ D+ +FS++G+I N +VRD+ +G +AF+ +++ +S
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 294
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 36.3 bits (80), Expect = 0.028
Identities = 17/52 (32%), Positives = 33/52 (63%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
+FV L T+ D+ +FS++G+I N +VRD+ +G +AF+ +++ +S
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 225
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 36.3 bits (80), Expect = 0.028
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 362 ERELGSSSKTSWHDQYKDSAW---IFVGGLPYDLTEGDVICVFSQYGEI 499
+R LG SK +H + +FVGGLP + E D++ FS+YG +
Sbjct: 66 DRRLGRYSKYYYHHNVGPEVYSRKVFVGGLPSCVKESDILNFFSRYGRL 114
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 36.3 bits (80), Expect = 0.028
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
+FVG L ++ + F ++GE+ ++RD T K KG+ F+ Y
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 35.1 bits (77), Expect = 0.064
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
+FVG L ++ + F +G++ + ++RD T K KG+ F+ Y
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 70
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.064
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
+FVG L ++ + F +G++ + ++RD T K KG+ F+ Y
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 80
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 35.1 bits (77), Expect = 0.064
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
+FVG L ++ + F +G++ + ++RD T K KG+ F+ Y
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 183
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 35.1 bits (77), Expect = 0.064
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
+FVG L ++ + F +G++ + ++RD T K KG+ F+ Y
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 151
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.084
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 455 TEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCY 565
TE D+ VF ++GEI ++V D+ +G +GF F+ +
Sbjct: 88 TEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.084
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
IFVGG P TE ++ F ++ + ++ MV+ G+ KG+ F+ +E +
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVK-SLDGQSKGYGFITFETE 116
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 34.7 bits (76), Expect = 0.084
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
IFVGG P TE ++ F ++ + ++ MV+ G+ KG+ F+ +E +
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVK-SLDGQSKGYGFITFETE 117
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRST 583
IF+GGLP LTE V + +G + ++ D + G KG+AF Y D T
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLT 344
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRST 583
IF+GGLP LTE V + +G + ++ D + G KG+AF Y D T
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLT 344
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRST 583
IF+GGLP LTE V + +G + ++ D + G KG+AF Y D T
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLT 319
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRST 583
IF+GGLP LTE V + +G + ++ D + G KG+AF Y D T
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLT 322
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 559
I+V +P+ E D+ +F YG ++++ +V + K GF L
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTL 97
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
+++G +PY+ E DV YG+I NI+M GFAF+ +ED R
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSR 46
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
+++G +PY+ E DV YG+I NI+M GFAF+ +ED R
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSR 46
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 577
+++G +PY+ E DV YG+I NI+M GFAF+ +ED R
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSR 46
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 479 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
F YG I + ++ D+ G+ KGF F+C+E T
Sbjct: 337 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEAT 371
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 419 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
A ++VG L D+ E + FS G +++I + RD T G+A++ ++
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 479 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
F YG I + ++ D+ G+ KGF F+C+E T
Sbjct: 277 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEAT 311
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 419 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
A ++VG L D+ E + FS G +++I + RD T G+A++ ++
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 479 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
F YG I + ++ D+ G+ KGF F+C+E T
Sbjct: 274 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEAT 308
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 479 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTT 586
F YG I + ++ D+ G+ KGF F+C+E T
Sbjct: 337 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEAT 371
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 419 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 568
A ++VG L D+ E + FS G +++I + RD T G+A++ ++
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 559
I+V +P+ E D+ +F YG ++++ +V + K GF L
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTL 97
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 410 KDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTTL 589
+ S ++VG L Y E V +F + G++ + M D+ P GF F+ Y + L
Sbjct: 34 RTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAEL 93
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 31.5 bits (68), Expect = 0.79
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 479 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 574
F +YG I ++NM D TG +GFA + ++ +
Sbjct: 45 FKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 344 NVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIV 502
+++ +S+ L +S K + S +F+GGLP D++E V F +G+++
Sbjct: 220 SLMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
+++ GL + + + + S+YG I + + DK T KG+ F+ +E ++
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQA 160
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 580
+++ GL + + + + S+YG I + + DK T KG+ F+ +E ++
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQA 134
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +2
Query: 365 RELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVN------INMVRDK 526
RE GS + + K++ +FV G+ E + VFS G+I I + D+
Sbjct: 189 REFGSDGRV----ELKET--VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDR 242
Query: 527 TTGKPKGFAFLCYED 571
TG+PKG + + D
Sbjct: 243 NTGEPKGECMITFVD 257
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 425 IFVGGLPYDLTEGDVICVFSQYG 493
IFVGG+P+D+TE + F ++G
Sbjct: 297 IFVGGVPWDITEAALKDSFGEFG 319
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 562 AQKCKSFWFPGCFIS 518
A+KCK+FW+ GC S
Sbjct: 728 AEKCKAFWYGGCHTS 742
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 562 AQKCKSFWFPGCFIS 518
A+KCK+FW+ GC S
Sbjct: 942 AEKCKAFWYGGCHTS 956
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 562 AQKCKSFWFPGCFIS 518
A+KCK+FW+ GC S
Sbjct: 1078 AEKCKAFWYGGCHTS 1092
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 562 AQKCKSFWFPGCFIS 518
A+KCK+FW+ GC S
Sbjct: 1127 AEKCKAFWYGGCHTS 1141
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 562 AQKCKSFWFPGCFIS 518
A+KCK+FW+ GC S
Sbjct: 1127 AEKCKAFWYGGCHTS 1141
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 562 AQKCKSFWFPGCFIS 518
A+KCK+FW+ GC S
Sbjct: 1119 AEKCKAFWYGGCHTS 1133
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 562 AQKCKSFWFPGCFIS 518
A+KCK+FW+ GC S
Sbjct: 1130 AEKCKAFWYGGCHTS 1144
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 562 AQKCKSFWFPGCFIS 518
A+KCK+FW+ GC S
Sbjct: 1131 AEKCKAFWYGGCHTS 1145
>Z73911-3|CAC42339.1| 324|Caenorhabditis elegans Hypothetical
protein T12A7.7 protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -2
Query: 228 QLTFH-VPFTGKPVFY*LLCHVFTETYFIILI 136
+L+ H +PF P++ LL H+F E Y+ +L+
Sbjct: 27 KLSCHFIPFLTLPIYRSLLLHLFGEIYWTVLL 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,413,477
Number of Sequences: 27780
Number of extensions: 335118
Number of successful extensions: 1008
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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