Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_G13
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     27   0.17 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.92 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.8  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   4.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   8.6  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   8.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   8.6  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 449 FGHSMWHSVSVLCKRIGTSSLNKLGYS 369
           FG    H++S LCK +G S + K+ ++
Sbjct: 123 FGRVRDHNISALCKELGISVVQKVSHT 149


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 586 YYEDLDALNEFYGNDNPIVDKEKGAN 663
           YY  L + + +Y N  P +  E GAN
Sbjct: 267 YYSPLSSRSLYYVNTKPFMKSEYGAN 292


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
 Frame = +1

Query: 493 YVCDERNLDENRKDADN---YHVHQLQEERNY-----IDYYEDLDALNEF 618
           YV  ++N+ E     D    YH    Q+ R +     +D Y D +A+NEF
Sbjct: 31  YVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEF 80


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
 Frame = +1

Query: 493 YVCDERNLDENRKDADN---YHVHQLQEERNY-----IDYYEDLDALNEF 618
           YV  ++N+ E     D    YH    Q+ R +     +D Y D +A+NEF
Sbjct: 31  YVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEF 80


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = +1

Query: 301 CHICRHILNKLWLFRSKCLKRSSEYP 378
           CH+C    ++ WL +      + E P
Sbjct: 45  CHLCGKAFSRPWLLQGHIRTHTGEKP 70


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 449 SLTHAKPYRPGIAPNTFVMNEIWTKIVKTQIIITYTS 559
           S TH+ P+ PG AP T +     T    T    T T+
Sbjct: 642 SSTHSHPHEPG-APATTITTITTTTTTTTTTTTTTTT 677


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 526 RKDADNYHVHQLQEERNYIDYY 591
           R++   Y++HQ   E+  ++YY
Sbjct: 176 REERQAYYLHQFAPEQPDLNYY 197


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 691 YYHRLKRFKR*HLSLYQQSDYRYRKIH 611
           +Y R +   R     Y++ D RY K+H
Sbjct: 230 HYSRERSCSRDRNREYKEKDRRYEKLH 256


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 526 RKDADNYHVHQLQEERNYIDYY 591
           R++   Y++HQ   E+  ++YY
Sbjct: 176 REERQAYYLHQFAPEQPDLNYY 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,230
Number of Sequences: 438
Number of extensions: 4499
Number of successful extensions: 55
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)