Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_G09
         (862 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open readi...    51   6e-06
AC127383-1|AAY24008.1|  207|Homo sapiens unknown protein.              51   6e-06

>BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open reading
           frame 13 protein.
          Length = 511

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 34/106 (32%), Positives = 44/106 (41%)
 Frame = +2

Query: 374 IDLPEGTHIIGRGKFIVNDAXXMRVSXNHAXIEVXDTCVILKSXHQNPCFYLDKLSNSKR 553
           + L  G  +IGRG  +       RVS  HA +EV    + +K  H NPCFY     +   
Sbjct: 16  VALAPGETVIGRGPLL--GITDKRVSRRHAILEVAGGQLRIKPIHTNPCFYQSSEKSQLL 73

Query: 554 TLTQNXAQLLCNGDKLGILPDTYWFELIWCSSNVMKNDVTSNSTPL 691
            L  N    L  GD   +L D Y F ++   S V       NS  L
Sbjct: 74  PLKPNLWCYLNPGDSFSLLVDKYIFRILSIPSEVEMQCTLRNSQVL 119


>AC127383-1|AAY24008.1|  207|Homo sapiens unknown protein.
          Length = 207

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 34/106 (32%), Positives = 44/106 (41%)
 Frame = +2

Query: 374 IDLPEGTHIIGRGKFIVNDAXXMRVSXNHAXIEVXDTCVILKSXHQNPCFYLDKLSNSKR 553
           + L  G  +IGRG  +       RVS  HA +EV    + +K  H NPCFY     +   
Sbjct: 16  VALAPGETVIGRGPLL--GITDKRVSRRHAILEVAGGQLRIKPIHTNPCFYQSSEKSQLL 73

Query: 554 TLTQNXAQLLCNGDKLGILPDTYWFELIWCSSNVMKNDVTSNSTPL 691
            L  N    L  GD   +L D Y F ++   S V       NS  L
Sbjct: 74  PLKPNLWCYLNPGDSFSLLVDKYIFRILSIPSEVEMQCTLRNSQVL 119


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,963,584
Number of Sequences: 237096
Number of extensions: 1128483
Number of successful extensions: 1307
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)