Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_G07
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical pr... 38 0.009
U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of ap... 38 0.009
AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical ... 36 0.050
Z74045-2|CAA98553.1| 155|Caenorhabditis elegans Hypothetical pr... 35 0.066
U85911-1|AAB94330.1| 155|Caenorhabditis elegans inhibitor of ap... 35 0.066
Z81509-8|CAB04157.2| 310|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 4.3
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 4.3
AC199170-6|ABO33264.1| 325|Caenorhabditis elegans Hypothetical ... 29 4.3
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 4.3
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 4.3
AL034393-26|CAI59121.1| 936|Caenorhabditis elegans Hypothetical... 28 7.5
AL034393-25|CAI59120.1| 797|Caenorhabditis elegans Hypothetical... 28 7.5
AL034393-24|CAA22312.3| 833|Caenorhabditis elegans Hypothetical... 28 7.5
>Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical
protein C50B8.2 protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 497 TPEQLARNGFYYLGRGD---EVCCAFCKVEIMRWVEGDDPAADHRRWAPQCPFV 649
T E+LAR GFY + C FC +EI + + DDP H+ +P C FV
Sbjct: 45 TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 470 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVEIMRWVEGDDPAADHRRWAPQC 640
FD+ T ++LA+ G++ + + D+ C FC VE+ + E DDP +H++++ C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237
Query: 641 PFVR 652
F++
Sbjct: 238 DFIK 241
>U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of
apoptosis homolog protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 497 TPEQLARNGFYYLGRGD---EVCCAFCKVEIMRWVEGDDPAADHRRWAPQCPFV 649
T E+LAR GFY + C FC +EI + + DDP H+ +P C FV
Sbjct: 45 TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 470 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVEIMRWVEGDDPAADHRRWAPQC 640
FD+ T ++LA+ G++ + + D+ C FC VE+ + E DDP +H++++ C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237
Query: 641 PFVR 652
F++
Sbjct: 238 DFIK 241
>AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical
protein T12F5.2 protein.
Length = 329
Score = 35.5 bits (78), Expect = 0.050
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 288 CAGCKNATFHWSAHVILXASLQRHPHSRHLRRQLIKRIITTHSTSFLICPTCVVK 452
C+ CK + S H+ ++Q H + H I + + H +F IC TCV+K
Sbjct: 46 CSSCKMSGSETSFHICRECTIQHHEYDIH---TFIDQEPSIHPDAFTICSTCVLK 97
>Z74045-2|CAA98553.1| 155|Caenorhabditis elegans Hypothetical
protein T27F2.3 protein.
Length = 155
Score = 35.1 bits (77), Expect = 0.066
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +2
Query: 428 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVEIMRWV 592
DM ++RL TF D+ P T + +A+ GFY G C AFC E+
Sbjct: 10 DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68
Query: 593 EGDDPAADHRRWAPQCPFVR 652
E DDP +H + C FVR
Sbjct: 69 E-DDPWYEHTKRDEPCEFVR 87
>U85911-1|AAB94330.1| 155|Caenorhabditis elegans inhibitor of
apoptosis homolog protein.
Length = 155
Score = 35.1 bits (77), Expect = 0.066
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +2
Query: 428 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVEIMRWV 592
DM ++RL TF D+ P T + +A+ GFY G C AFC E+
Sbjct: 10 DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68
Query: 593 EGDDPAADHRRWAPQCPFVR 652
E DDP +H + C FVR
Sbjct: 69 E-DDPWYEHTKRDEPCEFVR 87
>Z81509-8|CAB04157.2| 310|Caenorhabditis elegans Hypothetical
protein F21A3.3 protein.
Length = 310
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/81 (23%), Positives = 37/81 (45%)
Frame = -3
Query: 374 VTGVWMSLKTRXEDNMSGPMKGRIFASRAFFNITNVAAAPFLATFVNSIGIFFLFFSNA* 195
V G + L+T+ + M+G + I S+ FN+ N + V+ G+ +
Sbjct: 230 VRGTQIRLETKYKKGMAGVFRDEIVKSKRMFNLINANSLEERVVMVDGRGVTTKWLKRYK 289
Query: 194 NVYSYVFV*SLTLVLQKQNSM 132
V++Y+ T V +K+ S+
Sbjct: 290 KVFNYMTDLIPTPVEKKRKSL 310
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 425 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 523
P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 425 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 523
P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>AC199170-6|ABO33264.1| 325|Caenorhabditis elegans Hypothetical
protein T08D2.5 protein.
Length = 325
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 321 SAHVILXASLQRHPHSRHLRRQLIKRIITTHSTSFLICPTCVVK 452
S H+ ++Q+H + H I + + H +F IC TCV+K
Sbjct: 7 SFHICRECTIQQHEYDIHT---FIDQEPSIHPDAFTICSTCVLK 47
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 425 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 523
P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 425 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 523
P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>AL034393-26|CAI59121.1| 936|Caenorhabditis elegans Hypothetical
protein Y18D10A.7c protein.
Length = 936
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = -3
Query: 413 MCRDYPFYQLTTKVTGVWMSLKTRXEDNMSGPMKGRIFAS--RAFFNITNVAAAPFLATF 240
MC PF LT + ++ L E + + P + RI + A +I+ + LA
Sbjct: 363 MCTVMPFLSLTIGIDDTFLMLAAWHETDRNLPYEKRIEKAMRHAAVSISITSLTDALAFL 422
Query: 239 VNSIG-----IFFLFFSNA*NVYSYVFV 171
+ SI I+F ++S+A ++ +++V
Sbjct: 423 IGSIAPLPAVIYFCYYSSAAILFIFLYV 450
>AL034393-25|CAI59120.1| 797|Caenorhabditis elegans Hypothetical
protein Y18D10A.7b protein.
Length = 797
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = -3
Query: 413 MCRDYPFYQLTTKVTGVWMSLKTRXEDNMSGPMKGRIFAS--RAFFNITNVAAAPFLATF 240
MC PF LT + ++ L E + + P + RI + A +I+ + LA
Sbjct: 347 MCTVMPFLSLTIGIDDTFLMLAAWHETDRNLPYEKRIEKAMRHAAVSISITSLTDALAFL 406
Query: 239 VNSIG-----IFFLFFSNA*NVYSYVFV 171
+ SI I+F ++S+A ++ +++V
Sbjct: 407 IGSIAPLPAVIYFCYYSSAAILFIFLYV 434
>AL034393-24|CAA22312.3| 833|Caenorhabditis elegans Hypothetical
protein Y18D10A.7a protein.
Length = 833
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = -3
Query: 413 MCRDYPFYQLTTKVTGVWMSLKTRXEDNMSGPMKGRIFAS--RAFFNITNVAAAPFLATF 240
MC PF LT + ++ L E + + P + RI + A +I+ + LA
Sbjct: 363 MCTVMPFLSLTIGIDDTFLMLAAWHETDRNLPYEKRIEKAMRHAAVSISITSLTDALAFL 422
Query: 239 VNSIG-----IFFLFFSNA*NVYSYVFV 171
+ SI I+F ++S+A ++ +++V
Sbjct: 423 IGSIAPLPAVIYFCYYSSAAILFIFLYV 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,295,745
Number of Sequences: 27780
Number of extensions: 355967
Number of successful extensions: 896
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -