Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_G05
         (1023 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.6  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   4.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
 Frame = +3

Query: 795 PAPFP--P*XSPPXXPPPXVPPXP 860
           PA FP  P   PP  PPP  P  P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGP 593


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 873 PGXNGGXGGXRGGGXXV 823
           PG  GG GG  GGG  V
Sbjct: 650 PGSGGGGGGGGGGGGSV 666


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.6 bits (51), Expect = 4.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -1

Query: 507 RXXXPXXTPXPRAXXPXPSRQAGTXPKRPPGXXGP 403
           R   P   P P    P PS++A    ++ PG  GP
Sbjct: 422 RATHPPVRPTPSVPRPLPSQEASPSGEQ-PGRMGP 455


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,366
Number of Sequences: 2352
Number of extensions: 5019
Number of successful extensions: 51
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 113052225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)