Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_G04
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical pr...   172   3e-43
U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...    35   0.067
AC084197-25|AAK68591.1|  609|Caenorhabditis elegans Hypothetical...    31   1.4  
U58757-5|AAC47919.3|  555|Caenorhabditis elegans Hypothetical pr...    29   5.8  
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AF040645-4|AAB94974.1|  306|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical
           protein K04D7.3 protein.
          Length = 483

 Score =  172 bits (418), Expect = 3e-43
 Identities = 80/167 (47%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
 Frame = +1

Query: 217 MLLRTSRSAHVFRGVRAYSVLQH-EPDKPNIQTAIPGPKSQQLLKELNTLQQAGAVQLFA 393
           ML R ++S+ + + VR  S + + EP  P+I T+IPGPKS+ L +E++ + Q  +V+   
Sbjct: 1   MLPRLAKSS-LIQQVRGVSAIANAEPSGPSISTSIPGPKSKALKQEMDKVHQTTSVRFHV 59

Query: 394 DYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKSLINRPALGVFP 573
           DY+KS GNY  DADGNA LD +TQISSLP+GYNHP+L+      H + SL++RPALG FP
Sbjct: 60  DYEKSFGNYVVDADGNALLDVYTQISSLPLGYNHPDLVKVASQPHLITSLVSRPALGSFP 119

Query: 574 SADWPEKLKNVLLSVGPVGLDNIATMMCGSCSIENAYKTVFIWYQTR 714
             D+ + + + L S+ P GL  + TM+CG+ + ENA KT FIWYQ +
Sbjct: 120 RTDFADGISHALTSIAPKGLKAVQTMLCGTSANENAIKTAFIWYQAQ 166



 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 26/53 (49%), Positives = 33/53 (62%)
 Frame = +2

Query: 719 RGGKLDFTPEEIDSCMLNXVPGSPKLSILSFEGKXHGRTFGALSTTRSKPLHK 877
           R G L      ++SCM    PG+P LS++ FEG  HGR+   LS TRSKP+HK
Sbjct: 167 RRGGLGPDALHLESCMNQQKPGTPNLSVMGFEGAFHGRSLCMLSVTRSKPIHK 219


>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score = 35.1 bits (77), Expect = 0.067
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = +1

Query: 337 QLLKELNTLQQAGAVQLFADY---DKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELL 507
           Q ++ L  L   G V  + D     K    + FD++G  +LD F  I ++ VG+ HP++ 
Sbjct: 2   QRVQALRPLLPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKIN 61

Query: 508 SAFEDQ 525
           +A  +Q
Sbjct: 62  AALTEQ 67


>AC084197-25|AAK68591.1|  609|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.19 protein.
          Length = 609

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 397 YDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 525
           YD+  G YFFD D + F    T   +  + Y   E L A++++
Sbjct: 81  YDEDTGEYFFDRDPDIFRHILTFYRTGKLHYPRHECLVAYDEE 123


>U58757-5|AAC47919.3|  555|Caenorhabditis elegans Hypothetical
           protein C01B10.9 protein.
          Length = 555

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 376 AVQLFADYDKSIGNYFFDADGNAFLDAF 459
           A  LF +    +GNYFFDAD     D F
Sbjct: 76  ATGLFEEEHGIVGNYFFDADTKKAFDYF 103


>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
           protein C18H2.1 protein.
          Length = 1770

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 433 DGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKSLI 546
           D  A    FTQ+ ++P   +  E + A E  +NLKSL+
Sbjct: 459 DTAALQSLFTQLKAMPSQSDDSESIKAIEKLNNLKSLL 496


>AF040645-4|AAB94974.1|  306|Caenorhabditis elegans Hypothetical
           protein F52C6.8 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 418 NFQYFCHNQQKAELLPLAVEC*VLSAAAATWARESLFEY 302
           N Q++     K E + + + C +L  A ATW  ++ FE+
Sbjct: 35  NVQWYMAVSHKKEDMAVYLHCNILGKAEATWCIDAEFEF 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,470,937
Number of Sequences: 27780
Number of extensions: 385334
Number of successful extensions: 859
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)