Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_G03
         (952 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.4  
01_04_0051 + 15430980-15431591                                         29   4.1  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = +2

Query: 815 PPRGXVGXXXXAXPRXXVPPXGGLXXPXPXXGGXLXXPPPXXXXXG 952
           PP+G         P    PP G    P P  GG    PPP     G
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385


>01_04_0051 + 15430980-15431591
          Length = 203

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = -2

Query: 912 PPXXGXGXXKP-PXGGTXXRGXAKXKXPTXPRGGKRRDRXSREPGRG 775
           PP       +P P G T      + +     RGG RR R  R  GRG
Sbjct: 133 PPHWAAAAQRPWPRGSTTPSWRCRRRMEAGARGGARRLRRRRRQGRG 179


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,296,047
Number of Sequences: 37544
Number of extensions: 237603
Number of successful extensions: 667
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)