Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_G02
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 51 3e-07
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 44 4e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 43 7e-05
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.006
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.008
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.010
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 34 0.032
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 32 0.13
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.39
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.91
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 29 1.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 2.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.7
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.8
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 26 8.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 50.8 bits (116), Expect = 3e-07
Identities = 43/158 (27%), Positives = 45/158 (28%), Gaps = 9/158 (5%)
Frame = +1
Query: 454 PPGPXXXKGGP------PXXXXXXPEQGXKGGXKGXPQXPGXPXKKXXXQGPXXXQXPXT 615
PP P G P P P G P G P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 616 AXSXXXXPXGPPPPXNPXQKXXP-PPPXGXPP-PKXAXXKXXGXXPPGXXPXXAPPXSPP 789
A P G PP P P P P G PP PK + P G P P + P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 790 PXPPXXXPPXXXXPPXXKXGXXXXXTXPPXXTPP-PXP 900
P P P PP K PP PP P P
Sbjct: 1170 PVP----APSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 46.4 bits (105), Expect = 6e-06
Identities = 39/156 (25%), Positives = 40/156 (25%), Gaps = 3/156 (1%)
Frame = +1
Query: 448 GXPPGPXXXKGGPPXXXXXX--PEQGXKGGXKGXPQXPGXPXKKXXXQGPXXXQXPXTAX 621
G PP P PP P G P+ G P A
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAA 1149
Query: 622 SXXXXPXGPPPPXNPXQKXXP-PPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXP 798
P G PP P P P P PP K PP P APP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP---VPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Query: 799 PXXXPPXXXXPPXXKXGXXXXXTXPPXXTPPPXPXP 906
PP PP P PP P P
Sbjct: 1207 VPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +2
Query: 683 PPPPXXXPPPXXPXXXXGGXPPPGXPPXXPPXXLPPXXXPPGXPXPXXPPXXXXXXXXXX 862
PP P P P P P PP P PP P PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 863 XXPPXXXXPPPXP 901
PP P P P
Sbjct: 1210 VPPPSTAPPVPTP 1222
Score = 36.7 bits (81), Expect = 0.005
Identities = 31/122 (25%), Positives = 33/122 (27%), Gaps = 4/122 (3%)
Frame = +1
Query: 553 PGXPXKKXXXQGPXXXQXPXTAXSXXXXPXGPPPPXNPXQKXXPPPPXGXPPPKXAXXKX 732
P P P P S P PPP P + P PP A
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPA---- 1087
Query: 733 XGXXPPGXXPXXAPPXSPPPXP-PXXXPPXXXXPPXXKXGXXXXXTXPPXXTP---PPXP 900
P G P P + PP P P P P PP P PP P
Sbjct: 1088 ----PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 901 XP 906
P
Sbjct: 1144 KP 1145
Score = 36.7 bits (81), Expect = 0.005
Identities = 29/112 (25%), Positives = 32/112 (28%), Gaps = 6/112 (5%)
Frame = +1
Query: 589 PXXXQXPXTAXSXXXXPXGPPPPXNPXQ-KXXPPPPXGXPP-PKXAXXKXXGXXPPGXXP 762
P P + P G PP P P P PP PK + P G P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 763 XXAPPXSPPPXPPXXXPPXXXXPPXXKXGXXXXXTXPPXXTP----PPXPXP 906
P + PP P P P PP P PP P P
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 33.5 bits (73), Expect = 0.042
Identities = 26/114 (22%), Positives = 27/114 (23%), Gaps = 1/114 (0%)
Frame = +1
Query: 562 PXKKXXXQGPXXXQXPXTAXSXXXXPXGPPPPXNPXQKXXPPPPXGXPPPKXAXXKXXGX 741
P K + P A PP P P G P
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE 1072
Query: 742 XPPGXXPXXAPPXSPPPXPPXXXPPXXXXPPXXKXGXXXXXTXPPXXTPP-PXP 900
P P APP P P P PP K P PP P P
Sbjct: 1073 IPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 29.5 bits (63), Expect = 0.69
Identities = 23/94 (24%), Positives = 23/94 (24%), Gaps = 4/94 (4%)
Frame = +1
Query: 637 PXGPPPPXNPXQKXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXPPXXXPP 816
P PP P K P K PP P P P P P
Sbjct: 986 PPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPI 1045
Query: 817 XXXXPPXXKXGXXXXXTXPPXXTP----PPXPXP 906
PP K PP P P P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Score = 29.5 bits (63), Expect = 0.69
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 1/72 (1%)
Frame = +2
Query: 683 PPPPXXXPPPXXPXXXXGGXPPPGXPPXXPPXXLPPXXXPP-GXPXPXXPPXXXXXXXXX 859
PP P P P G PP P PP P PP P PP
Sbjct: 1189 PPVPPPSEAPPVPKPSV-GVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Query: 860 XXXPPXXXXPPP 895
P P P
Sbjct: 1248 SVSTPRSSVPSP 1259
Score = 29.1 bits (62), Expect = 0.91
Identities = 18/73 (24%), Positives = 18/73 (24%)
Frame = +2
Query: 683 PPPPXXXPPPXXPXXXXGGXPPPGXPPXXPPXXLPPXXXPPGXPXPXXPPXXXXXXXXXX 862
PP P P P P P PP P P P PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 863 XXPPXXXXPPPXP 901
P P P P
Sbjct: 1143 PKPSVAAPPVPAP 1155
Score = 26.2 bits (55), Expect = 6.4
Identities = 19/79 (24%), Positives = 21/79 (26%)
Frame = +3
Query: 669 PKXXXPPPXXXPPPQXXPXKXXGXXPPRGXPPXXPPXXSPPXPXXXXXPXXXXPPXXXXR 848
P+ PP P P PP+ PP P S P P PP
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAP--LSKPVSTSPAAPLARVPPVPKLS 1018
Query: 849 XGXXXXXPPXXXXPPPTXP 905
P PP P
Sbjct: 1019 SKAPPVPLPSADAPPIPVP 1037
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 43.6 bits (98), Expect = 4e-05
Identities = 29/88 (32%), Positives = 29/88 (32%)
Frame = -3
Query: 904 GXVGGGXXXXGGXXXXXPXRXXXXGGXXXXGXXXXXGXGGEXXGGXXGGXPRGGXXPXXX 725
G GGG GG P GG G G GG GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 724 XGXXWGGGXXXGGGXXXFGXGFXGGGGP 641
G GG GGG FG G G GGP
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 38.7 bits (86), Expect = 0.001
Identities = 27/89 (30%), Positives = 27/89 (30%)
Frame = -1
Query: 903 GGXGGGXXXXGGXXXXXXXXFXXXGGXXGXGXPGGXXXGGRXXGGXXXXXXXXXXXXXFX 724
G GGG GG GG G G G G GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 723 XGXFGGGXXXGGGGXXFLGGVXXGGGAXG 637
G FGGG GGG GG G G G
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 31.9 bits (69), Expect = 0.13
Identities = 29/88 (32%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = -2
Query: 797 GXGGGXXGGAXXGXXPGGXXPXXFXXAXLGGGXPXGGGGXXFWXGFXG-GGGPXGXXXXX 621
G G G GG G PG P F GG GG G G GGGP G
Sbjct: 187 GGGFGGFGGGSGGPPPG---PGGF------GGFGGFGGEGHHHGGHGGFGGGPGGFEGGP 237
Query: 620 XAVXGXWXXXGPXLXXFXXGXPGXWGXP 537
G G L F G G G P
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Frame = +1
Query: 367 PGXPRGXGGXXXLXGRGXGXGXGXCFXGXP----PGPXXXKGGPPXXXXXXPE-QGXKGG 531
P P G GG G G G F G P GP GGP G GG
Sbjct: 201 PPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
Query: 532 XKGXPQXPGXP 564
G P G P
Sbjct: 261 FGGGPGGHGGP 271
Score = 26.2 bits (55), Expect = 6.4
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = -2
Query: 812 GXXXGGXGGGXXGGAXXGXXPGGXXPXXFXXAXLGGGXPXGGGGXXFWXG---FXGGGGP 642
G GG GGG G GG GG GGG F G F GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 641 XG 636
G
Sbjct: 247 FG 248
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 42.7 bits (96), Expect = 7e-05
Identities = 37/142 (26%), Positives = 39/142 (27%), Gaps = 9/142 (6%)
Frame = +1
Query: 508 PEQGXKGGXKGXPQXPGXPXKKXXXQGPXXXQXPXTAXSXXXXPXGP-PPPXNPXQKXXP 684
P G PQ P P + P S P PPP P +
Sbjct: 343 PRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPA 402
Query: 685 PPPXGXP-----PPKXAXXKXXGXXPPGXXPXXAP--PXSPPPXPPXXXPPXXXXPPXXK 843
PP G PP PP P P P P PP PP P
Sbjct: 403 LPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL--PPSAPIAPPLP 460
Query: 844 XGXXXXXTXPPXX-TPPPXPXP 906
G PP PPP P P
Sbjct: 461 AGMPAAPPLPPAAPAPPPAPAP 482
Score = 33.5 bits (73), Expect = 0.042
Identities = 27/91 (29%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Frame = +1
Query: 646 PPPPXNPXQKXXPPPPXG--------XPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXPP 801
PPPP P ++ PP G PPP G P P +PPP PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP---LPPQG-RSAPPPPPP 366
Query: 802 XXXPPXXXXPPXXKXGXXXXXTXPPXXTPPP 894
P PP + PP PPP
Sbjct: 367 RSAPSTGRQPPPLSSS--RAVSNPP--APPP 393
Score = 32.7 bits (71), Expect = 0.074
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +2
Query: 689 PPXXXPPPXXPXXXXGGXPPPGXPPXXPPXX-LPPXXXPPGXPXPXXPPXXXXXXXXXXX 865
PP PP P PP PP PP + PP P P
Sbjct: 415 PPVPTPPSLPPSA------PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Query: 866 XPPXXXXPPPXP 901
PP PPP P
Sbjct: 469 LPPAAPAPPPAP 480
Score = 32.3 bits (70), Expect = 0.097
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = +1
Query: 649 PPPXNPXQKXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXPPXXXPPXXXX 828
PP N + PP P P A PP P AP P P PP
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSL-PMGAPAAPPLPPSAPIAPPLPAG 462
Query: 829 PPXXKXGXXXXXTXPPXXTPPP 894
P PP P P
Sbjct: 463 MPAAPPLPPAAPAPPPAPAPAP 484
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +2
Query: 692 PXXXPPPXXPXXXXGGXPPPGXPPXXPPXXLPPXXXPPGXPXPXXPPXXXXXXXXXXXXP 871
P PP P PP PP PP P P P P P P
Sbjct: 415 PPVPTPPSLPP-----SAPPSLPPSAPPSL--PMGAPAAPPLPPSAPIAPPLPAGMPAAP 467
Query: 872 PXXXXPPPXPP 904
P P PP
Sbjct: 468 PLPPAAPAPPP 478
Score = 29.9 bits (64), Expect = 0.52
Identities = 24/105 (22%), Positives = 24/105 (22%), Gaps = 3/105 (2%)
Frame = +3
Query: 600 PXXXNGXXXXGXPXGPPPPXKPXPKXXXPPP---XXXPPPQXXPXKXXGXXPPRGXPPXX 770
P NG P PPPP PP PPP G PP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 771 PPXXSPPXPXXXXXPXXXXPPXXXXRXGXXXXXPPXXXXPPPTXP 905
P P PP P PP P
Sbjct: 385 VSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Score = 29.9 bits (64), Expect = 0.52
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 683 PPPPXXXPPPXXPXXXXGGXPPPGXPPXXPPXXLPPXXXPPGXPXPXXPP 832
P P PP P G P PP P P P P P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 29.5 bits (63), Expect = 0.69
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 7/94 (7%)
Frame = +3
Query: 645 PPPPXKPXPKXXXPPP-------XXXPPPQXXPXKXXGXXPPRGXPPXXPPXXSPPXPXX 803
PPPP P + PP PPP P P PP PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP--LPPQGRSAPPPPPPRS 368
Query: 804 XXXPXXXXPPXXXXRXGXXXXXPPXXXXPPPTXP 905
PP R PP PPP P
Sbjct: 369 APSTGRQPPPLSSSR---AVSNPP---APPPAIP 396
Score = 29.1 bits (62), Expect = 0.91
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 683 PPPPXXXPPPXXPXXXXGGXPPPGXPPXXPPXXLPPXXXPPGXPXPXXPP 832
PP PP P P P P PP PP P PP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/88 (26%), Positives = 24/88 (27%)
Frame = +1
Query: 637 PXGPPPPXNPXQKXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXPPXXXPP 816
P PP P PPP PPP PP P P S P P
Sbjct: 237 PSSRPPERVPSLSAPAPPPI--PPPSNGTVSS----PPNSPPRPIAPVSMNPAINSTSKP 290
Query: 817 XXXXPPXXKXGXXXXXTXPPXXTPPPXP 900
PP + PPP P
Sbjct: 291 -PLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/90 (26%), Positives = 24/90 (26%), Gaps = 16/90 (17%)
Frame = +2
Query: 683 PPPPXXXPPPXXPXXXXGGXPPPGXPPXXPP--------------XXLPPXXXP--PGXP 814
PPPP P G PP PP P PP P PG
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRS 399
Query: 815 XPXXPPXXXXXXXXXXXXPPXXXXPPPXPP 904
P PP P PP PP
Sbjct: 400 APALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 3/59 (5%)
Frame = +1
Query: 664 PXQKXXPPPPXGXP---PPKXAXXKXXGXXPPGXXPXXAPPXSPPPXPPXXXPPXXXXP 831
P PP P P PP+ PP P SPP PP P P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Score = 27.1 bits (57), Expect = 3.7
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +1
Query: 673 KXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXPPXXXPPXXXXPPXXKXGX 852
K PPPP PPP + G P G + PPP P PP G
Sbjct: 308 KKRPPPP---PPPSR---RNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP---QGR 358
Query: 853 XXXXTXPPXXTPPPXPXP 906
PP P P
Sbjct: 359 SAPPPPPPRSAPSTGRQP 376
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 636 PXGPPPPXKPXPKXXXPPPXXXPPPQXXPXKXXGXXPPRGXPP 764
P PP P PPP PPP PPR P
Sbjct: 237 PSSRPPERVPSLSAPAPPP--IPPPSNGTVSSPPNSPPRPIAP 277
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +3
Query: 636 PXGPPPPXKPXPKXXXPPPXXXPPPQXXPXKXXGXXPPRGXPPXXPPXXSPPXP 797
P PP P PPP PPP P G PP PP P +P P
Sbjct: 1694 PQSAAPPQMSAPTPP-PPPMSVPPPPSAPPMPAG--PPSAPPPPLPASSAPSVP 1744
Score = 33.5 bits (73), Expect = 0.042
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +2
Query: 683 PPPPXXXPPPXXPXXXXGGXPPPGXPPXXPPXXLPPXXXPPGXPXP 820
PPPP PPP P P PP PP L P P P P
Sbjct: 1708 PPPPMSVPPPP------SAPPMPAGPPSAPPPPL-PASSAPSVPNP 1746
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +1
Query: 637 PXGPPPPXNPXQKXX--PPPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXP 798
P P P PPPP PPP A G PP P P S P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG--PPSAPPPPLPASSAPSVP 1744
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +1
Query: 652 PPXNPXQKXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXA-PPXSPPPXPPXXXPPXXXX 828
PP P P PPP PP P A PP +PPP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPP----PPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 829 P 831
P
Sbjct: 1746 P 1746
Score = 29.1 bits (62), Expect = 0.91
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Frame = +2
Query: 692 PXXXPPPXXPXXXXGGXPPPGXPPXXPPXXLPPXXX-PPGXPXPXXP 829
P P P PPP PP PP PP P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +1
Query: 682 PPPPXGXPP--PKXAXXKXXGXXPPGXXPXXAPPXSPPPXPPXXXPPXXXXPP 834
P P PP P+ A P P PP PP PP P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP--PPSAPPMPAGPPSAPPP 1733
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 435 PXPPPXAXPXKXXXPPXPPGXP 370
P PPP + P PP P G P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Frame = +3
Query: 651 PPXKPX----PKXXXPPPXXXPPPQXXPXKXXGXXPPRGXPPXXPPXXSPPXP 797
PP +P P+ P P PPP P P G PP PP PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPP--PPPMSVPPPPSAPPMPAG-PPSAPP---PPLP 1736
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 737 GXPPPGXPPXXPPXXLPPXXXPPGXPXPXXPPXXXXXXXXXXXXPPXXXXPPPXPP 904
G P P PP P PP P PP PP PP PP
Sbjct: 1679 GGMAPAHPVSTPPVR-PQSAAPPQMSAP-TPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/43 (27%), Positives = 13/43 (30%)
Frame = +2
Query: 704 PPPXXPXXXXGGXPPPGXPPXXPPXXLPPXXXPPGXPXPXXPP 832
P P PP P PP + P P P PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = +2
Query: 686 PPPXXXPPPXXPXXXXGGXPPPGXPPXX--PPXXLPPXXXPPGXPXPXXP 829
PP P P P PPP PP PP PP P P
Sbjct: 1699 PPQMSAPTPPPPPMSV--PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +2
Query: 746 PPGXPPXXPPXXLPPXXXPPGXPXPXXPP 832
PPG PP PP PP PP P P PP
Sbjct: 5 PPGNPPPPPP---PPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 734 GGXPPPGXPPXXPPXXLPPXXXPPG 808
G PPP PP P PP PPG
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 29.1 bits (62), Expect = 0.91
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 636 PXGPPPPXKPXPKXXXPPPXXXPPPQXXPXKXXGXXP 746
P G PPP P P P PPP K P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 29.1 bits (62), Expect = 0.91
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 462 PRGGPXKTXPXPPPXAXPXKXXXPPXPPG 376
P G P P PPP P PP PPG
Sbjct: 5 PPGNPPP--PPPPPGFEPPSQPPPPPPPG 31
Score = 29.1 bits (62), Expect = 0.91
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 743 PPPGXPPXXPPXXLPPXXXPPGXPXP 820
PP PP PP P PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 637 PXGPPPPXNPXQKXXPPPPXGXPPPKXAXXKXXGXXP 747
P G PPP P PP PPP K P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 686 PPPXXXPPPXXPXXXXGGXPPPGXPP 763
PP PPP P PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 689 PPXXXPPPXXPXXXXGGXPPPGXPPXXPP 775
PP PPP P G PP PP PP
Sbjct: 5 PPGNPPPPPPPP---GFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 760 PXXAPPXSPPPXPPXXXPPXXXXPP 834
P PP PPP PP PP PP
Sbjct: 5 PPGNPP--PPPPPPGFEPPSQPPPP 27
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 630 GXPXGPPPPXKPXPKXXXPPPXXXPPP 710
G P PPPP P PPP PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPP---PPP 30
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 651 PPXKPXPKXXXPPPXXXPPPQXXPXKXXGXXPPR 752
PP P P PPP PP Q P G R
Sbjct: 5 PPGNPPPPP--PPPGFEPPSQPPPPPPPGYVKKR 36
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +1
Query: 646 PPPPXNPXQKXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXP 798
PPPP P P PPP PP PP PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 645 PPPPXKPXPKXXXPPPXXXPPPQXXPXKXXGXXPPRGXPPXXPPXXSPPXP 797
PPPP P P PPP PP G PP PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 648 PPPXKPXPKXXXPPPXXXPPPQXXPXKXXGXXPPRGXPPXXPPXXSPPXP 797
PPP P P P P P P P G PP PP PP P
Sbjct: 732 PPP--PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 33.9 bits (74), Expect = 0.032
Identities = 20/74 (27%), Positives = 20/74 (27%)
Frame = +1
Query: 673 KXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXPPXXXPPXXXXPPXXKXGX 852
K PPPP P A P PP PP PP PP G
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Query: 853 XXXXTXPPXXTPPP 894
P P P
Sbjct: 790 SRYYAPAPQAEPEP 803
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +2
Query: 758 PPXXPPXXLPPXXXPPGXPXPXXPPXXXXXXXXXXXXPP--XXXXPPPXPP 904
PP PP + P P P P PP PP PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPA--PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 642 GPPPPXKPXPKXXXPPPXXXPPP 710
GPPPP P PP PPP
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 553 PGXPXKKXXXQGPXXXQXPXTAXSXXXXPXGPPPPXNPXQKXXPPPPXGXPPP 711
P P P P A P PPPP PPPP PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP---PPP 783
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.5 bits (78), Expect = 0.010
Identities = 22/83 (26%), Positives = 23/83 (27%)
Frame = +3
Query: 645 PPPPXKPXPKXXXPPPXXXPPPQXXPXKXXGXXPPRGXPPXXPPXXSPPXPXXXXXPXXX 824
P P P P+ PP PP P PP P PP S P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP--IPSKAPPIPSSLPPPAQPAAPVK 182
Query: 825 XPPXXXXRXGXXXXXPPXXXXPP 893
PP PP PP
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPP 205
Score = 35.1 bits (77), Expect = 0.014
Identities = 26/97 (26%), Positives = 28/97 (28%), Gaps = 2/97 (2%)
Frame = +1
Query: 607 PXTAXSXXXXPXGPPPPXNPXQKXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXAP--PX 780
P +A P P P PP P PPP P P AP P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQ-------PAAPVKSPPSAPSLPS 192
Query: 781 SPPPXPPXXXPPXXXXPPXXKXGXXXXXTXPPXXTPP 891
+ PP PP PP P PP P
Sbjct: 193 AVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAP 229
Score = 33.9 bits (74), Expect = 0.032
Identities = 23/86 (26%), Positives = 24/86 (27%)
Frame = +1
Query: 637 PXGPPPPXNPXQKXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXPPXXXPP 816
P P P P + PP PP PP P APP PP
Sbjct: 124 PPSAPAPPTPQSELRPPT--SAPPRPSIPPPSPASAPP--IPSKAPPIPSSLPPPAQPAA 179
Query: 817 XXXXPPXXKXGXXXXXTXPPXXTPPP 894
PP PP PPP
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 29.9 bits (64), Expect = 0.52
Identities = 18/81 (22%), Positives = 19/81 (23%)
Frame = +1
Query: 664 PXQKXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXPPXXXPPXXXXPPXXK 843
P PP P P + PP P PP P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 844 XGXXXXXTXPPXXTPPPXPXP 906
PP P P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = +3
Query: 684 PPPXXXPPPQXXPXKXXGXXPPRGXPPXXPPXXSPPXPXXXXXPXXXXPP 833
PP PP + PPR P P +PP P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 33.9 bits (74), Expect = 0.032
Identities = 24/92 (26%), Positives = 26/92 (28%), Gaps = 5/92 (5%)
Frame = +3
Query: 645 PPPPXKPXP-KXXXPPPXXXPPPQXXPXKXXGXXPPRGXPP----XXPPXXSPPXPXXXX 809
PPPP P + PPP P + P P PP P PP P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 810 XPXXXXPPXXXXRXGXXXXXPPXXXXPPPTXP 905
PP G PP P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 299
Score = 32.3 bits (70), Expect = 0.097
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Frame = +3
Query: 645 PPPPXKPXP-KXXXPPPXXXPPPQXXPXKXXGXXPPRGXPP----XXPPXXSPPXPXXXX 809
PPPP P + PPP P + P P PP P PP P
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 319
Query: 810 XPXXXXPPXXXXRXGXXXXXPP 875
PP G PP
Sbjct: 320 PGEHMPPPPMHHEPGEHMPPPP 341
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 683 PPPPXXXPPPXXPXXXXGGXPP-PGXPPXXPPXXLPPXXXPPGXPXP 820
P PP PP P G P P PP P PPG P P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAP 538
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 10/60 (16%)
Frame = +2
Query: 683 PPPPXXXPPPXXPXXXXGGXPP----------PGXPPXXPPXXLPPXXXPPGXPXPXXPP 832
PPPP PP P P PP P P PP P P PP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/72 (25%), Positives = 19/72 (26%), Gaps = 6/72 (8%)
Frame = +3
Query: 636 PXGPPPPXKPXPKXXXPPPXXXPPPQXXPXKXXGXXPP------RGXPPXXPPXXSPPXP 797
P P P PPP PPP P R P PP +P
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQA 232
Query: 798 XXXXXPXXXXPP 833
P PP
Sbjct: 233 DPLPAPPPPPPP 244
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.1 bits (62), Expect = 0.91
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 683 PPPPXXXPPPXXPXXXXGGXPPPGXPPXXPPXXLPPXXXPPGXPXP 820
PPPP P P P PP PP PG P P
Sbjct: 1884 PPPPMALPKAGPP----SAAPTSALPPAGPPAGATAISGNPGMPAP 1925
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/46 (28%), Positives = 13/46 (28%)
Frame = +2
Query: 758 PPXXPPXXLPPXXXPPGXPXPXXPPXXXXXXXXXXXXPPXXXXPPP 895
PP PP LP P P PP P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +3
Query: 663 PXPKXXXPPPXXXPPPQXXPXKXXGXXPPRGXPPXXP 773
P K PPP P + P + PP PP P
Sbjct: 44 PVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPP 80
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 646 PPPPXNPXQKXXPPPPXGXPPPKXAXXKXXGXXPPGXXPXXAPPXSPPPXPPXXXPPXXX 825
PPPP P PPPK PP PP P P P
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGET----YHPPTASGTRVPPVQQPSHPNPYTPVAPQ 963
Query: 826 XP 831
P
Sbjct: 964 SP 965
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -2
Query: 905 GXGXGGGVXXGGXVXXXXXPXXXXGGXXXXGGXXXGGXGGGXXGGAXXGXXPG 747
G G GG G GG GG GG GGG GG+ G G
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGF---GGGSRGGFGGGSRGGSRGGFRGG 185
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -1
Query: 720 GXFGGGXXX--GGGGXXFLGGVXXGGGAXGGXXXRXG 616
G FGGG GGG GG GGA GG G
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 25.8 bits (54), Expect = 8.5
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = -3
Query: 853 PXRXXXXGGXXXXGXXXXXGXGGEXXGGXXGGXPRGGXXPXXXXGXXWGGGXXXGGGXXX 674
P GG G GG GG GG RGG G GG G G
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGG--FGGGRGG-ARGGGRGGARGGRGGRGGARGGRGGSS 61
Query: 673 FGXGFXGGG 647
G G GG
Sbjct: 62 GGRGGAKGG 70
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 642 GPPPPXKPXPKXXXPPP 692
GPPPP +P PK P
Sbjct: 426 GPPPPVQPKPKISPTTP 442
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.153 0.546
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,092,983
Number of Sequences: 5004
Number of extensions: 38079
Number of successful extensions: 678
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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