Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F23
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0224 + 28500745-28500978,28501933-28502332,28502416-285024...    29   3.8  
04_04_0463 - 25397837-25399693,25402136-25402405                       28   8.8  

>05_07_0224 +
           28500745-28500978,28501933-28502332,28502416-28502480,
           28502633-28502692,28502865-28503014,28503386-28503541,
           28503648-28503785,28503874-28503947,28504172-28504273,
           28505415-28505604,28505756-28505830
          Length = 547

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 164 HPRTRRVSRCGFKILRPKDNADVDQPDAKEENLEGD 271
           H R+RRVS   F +    D+   D  D + E+ EGD
Sbjct: 14  HHRSRRVSSSSFHLTTTGDDTVKDLHDPRREDAEGD 49


>04_04_0463 - 25397837-25399693,25402136-25402405
          Length = 708

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -3

Query: 410 SSHRLFHLHRVSHH 369
           S+ RLFHL R+SHH
Sbjct: 319 SARRLFHLQRISHH 332


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,206,667
Number of Sequences: 37544
Number of extensions: 190899
Number of successful extensions: 464
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)