Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F22
         (850 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    26   0.33 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.33 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.3  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   7.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 727 PVSHISVLDLNTHXILLYTWKAXDIVQQ 810
           P SH+   DL TH +LL  W   D  ++
Sbjct: 269 PNSHLYDYDLTTHVMLLSDWMHEDATER 296


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 727 PVSHISVLDLNTHXILLYTWKAXDIVQQ 810
           P SH+   DL TH +LL  W   D  ++
Sbjct: 269 PNSHLYDYDLTTHVMLLSDWMHEDATER 296


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 183 FQMV*KHHRCSLDMCK*CE*Y 121
           F M  +HH+  LDM K C  Y
Sbjct: 182 FDMFYQHHKIVLDMGKNCVTY 202


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 295 FEGHQYRSLCYIFRSLTPKIY 233
           F+G Q  SL ++  SL+P IY
Sbjct: 180 FKGAQDLSLLHVSDSLSPGIY 200


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 419 SKMNVASFCIMVIYLTNLGIAEPATRK 499
           + +N+A    + +   NL   +PATRK
Sbjct: 306 ASLNIARRVQVTLLQVNLSQVDPATRK 332


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 419 SKMNVASFCIMVIYLTNLGIAEPATRK 499
           + +N+A    + +   NL   +PATRK
Sbjct: 306 ASLNIARRVQVTLLQVNLSQVDPATRK 332


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 419 SKMNVASFCIMVIYLTNLGIAEPATRK 499
           + +N+A    + +   NL   +PATRK
Sbjct: 306 ASLNIARRVQVTLLQVNLSQVDPATRK 332


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 239 NIPHMLSITVSKRSTAIQSFKWFKNT 162
           N+PH+  + +S  S     F  F+NT
Sbjct: 270 NMPHLQVLDLSHNSLYELDFDTFRNT 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,807
Number of Sequences: 336
Number of extensions: 3807
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)