Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F21
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    26   0.35 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   7.5  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 145 RHETYVCHLENRSSMATHNQ 204
           +H+  VCHLE R + + +NQ
Sbjct: 132 KHQGAVCHLETRPNQSDNNQ 151


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 468 FCIIYFIVYSFWLFSSN 418
           FC I F +Y +W  +SN
Sbjct: 15  FCCILFFIYLYWQQTSN 31



 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 226 GWWKRSY*SLCNPYKIW 276
           G W+ +  + C+PY+ W
Sbjct: 512 GRWRETGEAACDPYRPW 528


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 471 LFCIIYFIVYSFWLFSSNHFSSA 403
           L CI YF+V  F+L    +F  A
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCA 152


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
 Frame = -2

Query: 86  LQWHGHHIVSTVFQK----LKECPI 24
           + WHGHH  ++ +      + +CPI
Sbjct: 133 IHWHGHHQKNSPYMDGVPFVTQCPI 157


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 419 LEENNQNEYTMKYIIQNNMGGCHKMLS 499
           L E ++ EY  +++I   + GC + +S
Sbjct: 244 LFEASREEYVTRHLIDGRIIGCDQRIS 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,809
Number of Sequences: 336
Number of extensions: 3211
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)