Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_F21
(894 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457117-1|CAG33398.1| 251|Homo sapiens MRPL16 protein. 143 7e-34
BC019269-1|AAH19269.1| 251|Homo sapiens mitochondrial ribosomal... 143 7e-34
BC001040-1|AAH01040.1| 251|Homo sapiens mitochondrial ribosomal... 143 7e-34
AK000491-1|BAA91202.1| 251|Homo sapiens protein ( Homo sapiens ... 143 7e-34
AF183428-1|AAG09697.1| 251|Homo sapiens 28.4 kDa protein protein. 143 7e-34
AB049642-1|BAB40847.1| 251|Homo sapiens mitochondrial ribosomal... 143 7e-34
AF275806-1|AAG23818.1| 54|Homo sapiens PNAS-111 protein. 36 0.20
>CR457117-1|CAG33398.1| 251|Homo sapiens MRPL16 protein.
Length = 251
Score = 143 bits (347), Expect = 7e-34
Identities = 67/155 (43%), Positives = 95/155 (61%)
Frame = +2
Query: 65 YGVRATGGGXMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXXA 244
+ + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT A
Sbjct: 87 FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146
Query: 245 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQKAAEEKWLE 424
IDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+ +++ E
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206
Query: 425 ENNQNEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 529
NNQN +T + I NM G K+LSP+D KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241
>BC019269-1|AAH19269.1| 251|Homo sapiens mitochondrial ribosomal
protein L16 protein.
Length = 251
Score = 143 bits (347), Expect = 7e-34
Identities = 67/155 (43%), Positives = 95/155 (61%)
Frame = +2
Query: 65 YGVRATGGGXMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXXA 244
+ + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT A
Sbjct: 87 FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146
Query: 245 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQKAAEEKWLE 424
IDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+ +++ E
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206
Query: 425 ENNQNEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 529
NNQN +T + I NM G K+LSP+D KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241
>BC001040-1|AAH01040.1| 251|Homo sapiens mitochondrial ribosomal
protein L16 protein.
Length = 251
Score = 143 bits (347), Expect = 7e-34
Identities = 67/155 (43%), Positives = 95/155 (61%)
Frame = +2
Query: 65 YGVRATGGGXMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXXA 244
+ + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT A
Sbjct: 87 FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146
Query: 245 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQKAAEEKWLE 424
IDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+ +++ E
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206
Query: 425 ENNQNEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 529
NNQN +T + I NM G K+LSP+D KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241
>AK000491-1|BAA91202.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ20484 fis, clone KAT07770. ).
Length = 251
Score = 143 bits (347), Expect = 7e-34
Identities = 67/155 (43%), Positives = 95/155 (61%)
Frame = +2
Query: 65 YGVRATGGGXMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXXA 244
+ + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT A
Sbjct: 87 FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146
Query: 245 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQKAAEEKWLE 424
IDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+ +++ E
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206
Query: 425 ENNQNEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 529
NNQN +T + I NM G K+LSP+D KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241
>AF183428-1|AAG09697.1| 251|Homo sapiens 28.4 kDa protein protein.
Length = 251
Score = 143 bits (347), Expect = 7e-34
Identities = 67/155 (43%), Positives = 95/155 (61%)
Frame = +2
Query: 65 YGVRATGGGXMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXXA 244
+ + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT A
Sbjct: 87 FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146
Query: 245 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQKAAEEKWLE 424
IDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+ +++ E
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206
Query: 425 ENNQNEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 529
NNQN +T + I NM G K+LSP+D KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241
>AB049642-1|BAB40847.1| 251|Homo sapiens mitochondrial ribosomal
protein L16 (L16mt) protein.
Length = 251
Score = 143 bits (347), Expect = 7e-34
Identities = 67/155 (43%), Positives = 95/155 (61%)
Frame = +2
Query: 65 YGVRATGGGXMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXXA 244
+ + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT A
Sbjct: 87 FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146
Query: 245 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQKAAEEKWLE 424
IDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+ +++ E
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206
Query: 425 ENNQNEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 529
NNQN +T + I NM G K+LSP+D KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241
>AF275806-1|AAG23818.1| 54|Homo sapiens PNAS-111 protein.
Length = 54
Score = 35.9 bits (79), Expect = 0.20
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 395 QKAAEEKWLEENNQNEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 529
+K EE+ E NNQN +T + I NM G K+LSP+D KY
Sbjct: 2 RKDQEER--ERNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,684,466
Number of Sequences: 237096
Number of extensions: 1783954
Number of successful extensions: 3482
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3481
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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