Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F21
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.7  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 149 CLISWQQLSEPFQNVRV 99
           CLISW  L +P Q +++
Sbjct: 429 CLISWNPLMQPKQPIKL 445


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 89  HLQWHGHHIVSTVFQ 45
           HLQ H HH+ ST  Q
Sbjct: 143 HLQNHHHHLQSTAVQ 157


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/56 (16%), Positives = 23/56 (41%)
 Frame = +2

Query: 311  YAEVHDMLRIISERLPFKAEPVSEEILEQKAAEEKWLEENNQNEYTMKYIIQNNMG 478
            Y     +++++ +  P     +   ++  ++   KW  ++       KYI+Q   G
Sbjct: 893  YGRDQQLVQLLVQEPPQPPNSLETAMVASRSINVKWQHKSQDTTEVTKYILQYKEG 948


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/56 (16%), Positives = 23/56 (41%)
 Frame = +2

Query: 311  YAEVHDMLRIISERLPFKAEPVSEEILEQKAAEEKWLEENNQNEYTMKYIIQNNMG 478
            Y     +++++ +  P     +   ++  ++   KW  ++       KYI+Q   G
Sbjct: 889  YGRDQQLVQLLVQEPPQPPNSLETAMVASRSINVKWQHKSQDTTEVTKYILQYKEG 944


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 6/40 (15%), Positives = 23/40 (57%)
 Frame = -2

Query: 140 SWQQLSEPFQNVRVSXFHLQWHGHHIVSTVFQKLKECPIV 21
           +W  ++E ++++ ++    +++ H++       LK+ P++
Sbjct: 442 TWLPVNENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVI 481


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 157 YVCHLENRSSMATHNQERTRSANGWW 234
           YVC  EN +  A+H+   T +    W
Sbjct: 656 YVCTAENAAGTASHSTTLTVNVPPRW 681


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,472
Number of Sequences: 438
Number of extensions: 3701
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)