Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_F19
(877 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 226 5e-58
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 208 1e-52
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 107 7e-48
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 173 6e-42
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 171 1e-41
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 141 2e-32
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 140 6e-32
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 129 1e-28
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 127 4e-28
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 123 7e-27
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 116 8e-25
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 114 2e-24
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 49 4e-12
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 4e-12
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 67 6e-10
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 66 1e-09
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 42 3e-08
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 56 9e-07
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 2e-06
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 55 2e-06
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 3e-04
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 42 0.021
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 31 0.054
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 38 0.33
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 31 0.47
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 37 0.58
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 226 bits (553), Expect = 5e-58
Identities = 103/144 (71%), Positives = 115/144 (79%)
Frame = +2
Query: 224 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 403
QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAA
Sbjct: 39 QDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAA 98
Query: 404 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 583
Y TG E+NVEPVD+GPGAFRC+LDVGLARTTTGAR
Sbjct: 99 YCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGAR 158
Query: 584 VFGAMKGAVDGGLNVPHSIKRFPG 655
VFGAMKGAVDGGLN+PHS+KRFPG
Sbjct: 159 VFGAMKGAVDGGLNIPHSVKRFPG 182
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 49.6 bits (113), Expect = 1e-04
Identities = 32/70 (45%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY*N-*XSXXMLLNXLQ 830
GY AE+K FNA+VHRAHIFG SF RQFS+Y L + +
Sbjct: 182 GYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYK 241
Query: 831 KAHXAIRXDP 860
KAH AIR DP
Sbjct: 242 KAHQAIRNDP 251
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 208 bits (509), Expect = 1e-52
Identities = 94/145 (64%), Positives = 109/145 (75%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
+VFGA+KGAVDGGL++PHS KRFPG
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPG 182
Score = 76.6 bits (180), Expect = 8e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 48.8 bits (111), Expect = 2e-04
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY-*N*XSXXMLLNXLQ 830
GYD+ESK+FNAEVHR HI G ++ +QFS+Y N + M+ +
Sbjct: 182 GYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYK 241
Query: 831 KAHXAIRXDPXQXK 872
KAH AIR +P K
Sbjct: 242 KAHAAIRENPVYEK 255
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 107 bits (257), Expect(2) = 7e-48
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 376
VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 38 VQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 107 bits (256), Expect(2) = 7e-48
Identities = 58/114 (50%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Frame = +2
Query: 494 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGL*CRIQ 673
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPG +
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 674 KVQC*STQGSHLWFCMLLNT*EVL-NRMMRIFQXTIQQVLKLGXXAXAIEPXTK 832
+H++ + + L + F+ Q +KLG A IE K
Sbjct: 158 TFNA-EAHRAHIFGQHVADYMHALEDEDAEAFKRQFSQYIKLGIAADQIETIYK 210
Score = 78.6 bits (185), Expect = 2e-13
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRL 36
Score = 51.2 bits (117), Expect = 3e-05
Identities = 32/70 (45%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY*N*X-SXXMLLNXLQ 830
GYDAESK FNAE HRAHIFG +F RQFS+Y + + +
Sbjct: 151 GYDAESKTFNAEAHRAHIFGQHVADYMHALEDEDAEAFKRQFSQYIKLGIAADQIETIYK 210
Query: 831 KAHXAIRXDP 860
KAH AIR DP
Sbjct: 211 KAHDAIRADP 220
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 173 bits (420), Expect = 6e-42
Identities = 83/145 (57%), Positives = 99/145 (68%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38 VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY+TG +YNVE + F+ LD+GLARTTTG+
Sbjct: 98 AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS 156
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
++F MKG DGG+NVPHS RF G
Sbjct: 157 KIFAVMKGVADGGINVPHSESRFFG 181
Score = 71.3 bits (167), Expect = 3e-11
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36
Score = 34.7 bits (76), Expect = 3.1
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 633 IPSKDS--LGYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY-*N*XS 803
+P +S G+D ESK++NAE HR I G + RQFSK+ +
Sbjct: 172 VPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLN 231
Query: 804 XXMLLNXLQKAHXAIRXD 857
L+ QK H AIR D
Sbjct: 232 ADNLVATYQKVHSAIRAD 249
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 171 bits (417), Expect = 1e-41
Identities = 77/144 (53%), Positives = 96/144 (66%)
Frame = +2
Query: 224 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 403
QDKNKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYAA
Sbjct: 48 QDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYAAT 107
Query: 404 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 583
Y+TG +Y+VE D F+C+LD GL RT+TGAR
Sbjct: 108 YATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGAR 167
Query: 584 VFGAMKGAVDGGLNVPHSIKRFPG 655
VF A+KGAVDGGL++PH+ KRF G
Sbjct: 168 VFAALKGAVDGGLDIPHNEKRFAG 191
Score = 39.5 bits (88), Expect = 0.11
Identities = 21/33 (63%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +1
Query: 124 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRL 216
V K Y RYQVKF RRR G KTDY AR+RL
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRL 45
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 141 bits (341), Expect = 2e-32
Identities = 71/151 (47%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYAA
Sbjct: 61 LQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAA 120
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPG------AFRCYLDVGLA 562
AY+TG V + G F+ LDVGLA
Sbjct: 121 AYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLA 180
Query: 563 RTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 655
RTTTGARVFG +KGAVDGG+ VPH RFPG
Sbjct: 181 RTTTGARVFGVLKGAVDGGMAVPHRPNRFPG 211
Score = 64.9 bits (151), Expect = 3e-09
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQM 59
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 140 bits (338), Expect = 6e-32
Identities = 65/145 (44%), Positives = 86/145 (59%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YAA
Sbjct: 327 IQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAA 386
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY+TG +NV+ F+ LD GL RTTTG
Sbjct: 387 AYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGN 446
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
RVFG +KGA DGG+N+PHS RFPG
Sbjct: 447 RVFGVLKGACDGGINIPHSESRFPG 471
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 201
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 129 bits (311), Expect = 1e-28
Identities = 71/161 (44%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Frame = +2
Query: 182 KGKLIIMLVNASXVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELP 361
+GK A +QDKNKYN K R IVR +N + CQ+A S IEGD I+ A S EL
Sbjct: 25 EGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELI 84
Query: 362 RYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGA 532
RYG+ VGL NYAAAY+TG E + +
Sbjct: 85 RYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKP 144
Query: 533 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 655
+ +LDVG+ RTTTG RVF A+KGA DGGLN+PH RFPG
Sbjct: 145 IKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFPG 185
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKAL 36
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 127 bits (306), Expect = 4e-28
Identities = 65/145 (44%), Positives = 88/145 (60%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYAA
Sbjct: 38 VQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY+TG + N++ P F LD+GL R+T G
Sbjct: 98 AYATG---LLLARRTLKTLKMDKFYEGNKTIDGNLKTQRERP--FFAVLDIGLVRSTLGN 152
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
RVF A+KGA DGG+++PH+ +RFPG
Sbjct: 153 RVFAALKGAADGGIHIPHNNRRFPG 177
Score = 63.3 bits (147), Expect = 8e-09
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLXCSGQEQ 237
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL +++
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDK 43
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 123 bits (296), Expect = 7e-27
Identities = 67/151 (44%), Positives = 86/151 (56%)
Frame = +2
Query: 224 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 403
QDK KY KYRL+ R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY AA
Sbjct: 38 QDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAA 97
Query: 404 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 583
Y+TG EY + + P F+ LDVGLARTTTGA+
Sbjct: 98 YATG---LLVARRFLTQMKLADVFKTEITEEYLNDEENRRP--FKVILDVGLARTTTGAK 152
Query: 584 VFGAMKGAVDGGLNVPHSIKRFPGL*CRIQK 676
VF MKGAVDGGL +PH++ R L C+ K
Sbjct: 153 VFAVMKGAVDGGLFIPHNVCR---LACKFDK 180
Score = 47.2 bits (107), Expect = 5e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 121 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
K+VKN YF R+Q KF+RRRE KTDY R +L
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQL 35
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 116 bits (279), Expect = 8e-25
Identities = 62/128 (48%), Positives = 73/128 (57%)
Frame = +2
Query: 272 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 451
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 452 XXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 631
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 632 HSIKRFPG 655
HS KRFPG
Sbjct: 124 HSEKRFPG 131
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 114 bits (275), Expect = 2e-24
Identities = 61/145 (42%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
Frame = +2
Query: 224 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 403
QD N + K+RL+VR++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AA
Sbjct: 33 QDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAA 92
Query: 404 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVDNGPGAFRCYLDVGLARTTTGA 580
Y+TG Y+V + +D A R +LD+GLAR+T GA
Sbjct: 93 YATG--FLIGRRALTAMSLDEVYRPKEIDGTYSVTKDIDGEKKAPRVFLDIGLARSTRGA 150
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
RVFGA+KGA D GLNVPHS +F G
Sbjct: 151 RVFGALKGASDAGLNVPHSAAKFYG 175
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 136 KQYFKRYQVKFKRRREGKTDYYARKRL 216
+ Y K +QVK +RRREGKTDY R +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNM 30
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 48.8 bits (111), Expect(2) = 4e-12
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 527 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 655
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
Score = 45.6 bits (103), Expect(2) = 4e-12
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 251 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 415
K R+ VR+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 39.1 bits (87), Expect = 0.14
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 151 RYQVKFKRRREGKTDYYARKRLXCSGQEQI 240
RY+V +RRREGKT+YY R RL SG+ ++
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLVKSGKPRM 35
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 4e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 260 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 415
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2
Query: 554 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 655
GLARTTTG +VFGA+K VD GL++PHS K FPG
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPG 104
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 66.9 bits (156), Expect = 6e-10
Identities = 40/141 (28%), Positives = 65/141 (46%)
Frame = +2
Query: 224 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 403
QDK K+ K R+I+R S ++++ Q+ S ++GD I+ ++Y L + K NY +
Sbjct: 39 QDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFS 98
Query: 404 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 583
Y G YN + N +D+GL R T G +
Sbjct: 99 YLLG-----------YYFGKDLIEKVKQSETYNKK---NYSSKITAIIDIGLKRATIGNK 144
Query: 584 VFGAMKGAVDGGLNVPHSIKR 646
F +MKG+VD G+N+PH+ +
Sbjct: 145 SFASMKGSVDSGINIPHNYNK 165
Score = 33.5 bits (73), Expect = 7.2
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 133 NKQYFKRYQVKFKRRREGKTDYYARKRL 216
N Y R+++K +RRR GKTDY R +L
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKL 36
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 65.7 bits (153), Expect = 1e-09
Identities = 46/132 (34%), Positives = 64/132 (48%)
Frame = +2
Query: 257 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXX 436
R++VR +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTGML----- 88
Query: 437 XXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 616
+ V+ ++ G G LD+GLAR GARVF A+KGAVD
Sbjct: 89 --------------------FAVKALNAGYG--EAILDIGLARAKPGARVFAALKGAVDA 126
Query: 617 GLNVPHSIKRFP 652
GL+VP+ P
Sbjct: 127 GLDVPYGESILP 138
Score = 38.3 bits (85), Expect = 0.25
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 151 RYQVKFKRRREGKTDYYARKRLXCSG 228
RY V F+RR EGKTDYY R L SG
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSSG 31
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.5 bits (93), Expect(2) = 3e-08
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 527 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 637
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
Score = 39.5 bits (88), Expect(2) = 3e-08
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 251 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 415
K RL+ R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 151 RYQVKFKRRREGKTDYYARKRLXCSGQEQI 240
RY+V +RRRE +TDY+ R RL SG+ ++
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLLKSGKPRL 35
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +2
Query: 494 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 655
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVG 95
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect(2) = 2e-06
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +2
Query: 527 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 652
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 28.3 bits (60), Expect(2) = 2e-06
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 257 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 415
R +VR+SN TCQ+ GD ++ + L R+G + + A+Y TG
Sbjct: 34 RAVVRVSNTQTTCQLINYDSTGDEVIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 55.2 bits (127), Expect = 2e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 224 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 325
QDKNKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 50 QDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRL 47
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 33.9 bits (74), Expect(2) = 3e-04
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 257 RLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 415
R IVR++ K V QVA YS I GD I+ L +YGV + N Y G
Sbjct: 29 RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLAKYGVDLRGNNIQVCYLVG 81
Score = 33.9 bits (74), Expect(2) = 3e-04
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 527 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 652
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.9 bits (94), Expect = 0.021
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +1
Query: 151 RYQVKFKRRREGKTDYYARKRLXCSGQEQI 240
RY+V F+RRREG+T+Y+ R +L SGQ+++
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQDRV 35
Score = 41.1 bits (92), Expect = 0.036
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 545 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 652
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
Score = 37.1 bits (82), Expect = 0.58
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 257 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 415
R++VR S ++V Q+ EGD +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 30.7 bits (66), Expect(2) = 0.054
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 533 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 637
F +D+G R R+ +KG +DGG+ +P S
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVS 155
Score = 29.1 bits (62), Expect(2) = 0.054
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 251 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 415
K+R +N +++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 48 KFRSYFTTTNTNLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 37.9 bits (84), Expect = 0.33
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 157 QVKFKRRREGKTDYYARKRLXCSGQEQI*HT*ISSDCASLQQRCNMP 297
+++F+R +EGKTDYYARKRL + + +T D + QR ++P
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEY-NTPEXDDSSCNXQRYHLP 81
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 30.7 bits (66), Expect(2) = 0.47
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 266 VRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 415
V +SN++ Q+ +++GD ++ + +S L G K + A+Y TG
Sbjct: 33 VHISNENAQVQIHAPKMDGDVVIASGHSRYLASKGWKGSRKSIPASYLTG 82
Score = 25.8 bits (54), Expect(2) = 0.47
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 527 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 652
GA + G R T R+ A+KG D G++VP FP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVPIDPSTFP 132
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 37.1 bits (82), Expect = 0.58
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 545 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 652
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
Score = 33.9 bits (74), Expect = 5.5
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 154 YQVKFKRRREGKTDYYARKRL 216
Y+V+FKRRREGKT+Y R +L
Sbjct: 7 YKVQFKRRREGKTNYNKRYKL 27
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,083,994
Number of Sequences: 1657284
Number of extensions: 15158499
Number of successful extensions: 36622
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 35158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36605
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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