Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F19
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   7.3  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.6  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 550 CRLSTHHYWCSCLWSYEG 603
           C+  T HY C C + Y G
Sbjct: 76  CQDHTTHYTCHCPYGYTG 93


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 162  YLVPLEVLFVLHNFNESHILNLSYKVASTDGHQAKKKKQ 46
            +LVP      LH   E H+ +  YKV      Q  +K Q
Sbjct: 1228 HLVPQNCAPGLHYNPEEHMCDWKYKVKCVGRKQLAQKYQ 1266


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 312 GLKVTILCALLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDC 437
           G K  IL  +L  ++C VMV   +     + IQ+V Y + +C
Sbjct: 182 GNKPVILTVVLPLLACGVMVVTHITMAHFKIIQVVPYCYINC 223


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 440 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK 342
           E + +L ++ LNM Q +     SH  ++  VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,886
Number of Sequences: 336
Number of extensions: 4282
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)