Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_F19
(877 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 208 2e-53
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 208 2e-53
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 208 2e-53
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 208 2e-53
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 208 2e-53
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 208 2e-53
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 206 6e-53
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 6e-41
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 118 4e-26
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 58 3e-08
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 208 bits (509), Expect = 2e-53
Identities = 94/145 (64%), Positives = 109/145 (75%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
+VFGA+KGAVDGGL++PHS KRFPG
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPG 182
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 48.8 bits (111), Expect = 3e-05
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY-*N*XSXXMLLNXLQ 830
GYD+ESK+FNAEVHR HI G ++ +QFS+Y N + M+ +
Sbjct: 182 GYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYK 241
Query: 831 KAHXAIRXDPXQXK 872
KAH AIR +P K
Sbjct: 242 KAHAAIRENPVYEK 255
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 208 bits (509), Expect = 2e-53
Identities = 94/145 (64%), Positives = 109/145 (75%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
+VFGA+KGAVDGGL++PHS KRFPG
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPG 182
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 48.8 bits (111), Expect = 3e-05
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY-*N*XSXXMLLNXLQ 830
GYD+ESK+FNAEVHR HI G ++ +QFS+Y N + M+ +
Sbjct: 182 GYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYK 241
Query: 831 KAHXAIRXDPXQXK 872
KAH AIR +P K
Sbjct: 242 KAHAAIRENPVYEK 255
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 208 bits (509), Expect = 2e-53
Identities = 94/145 (64%), Positives = 109/145 (75%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
+VFGA+KGAVDGGL++PHS KRFPG
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPG 182
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFG-----FACC*IHEKS*TG**GSFXRQFSKY-*N*XSXXML 815
GYD+ESK+FNAEVHR HI G + C + E ++ +QFS+Y N + M+
Sbjct: 182 GYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDE-----DAYKKQFSQYIKNSVTPDMM 236
Query: 816 LNXLQKAHXAIRXDPXQXK 872
+KAH AIR +P K
Sbjct: 237 EEMYKKAHAAIRENPVYEK 255
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 208 bits (509), Expect = 2e-53
Identities = 94/145 (64%), Positives = 109/145 (75%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
+VFGA+KGAVDGGL++PHS KRFPG
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPG 182
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 48.8 bits (111), Expect = 3e-05
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY-*N*XSXXMLLNXLQ 830
GYD+ESK+FNAEVHR HI G ++ +QFS+Y N + M+ +
Sbjct: 182 GYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYK 241
Query: 831 KAHXAIRXDPXQXK 872
KAH AIR +P K
Sbjct: 242 KAHAAIRENPVYEK 255
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 208 bits (509), Expect = 2e-53
Identities = 94/145 (64%), Positives = 109/145 (75%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
+VFGA+KGAVDGGL++PHS KRFPG
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPG 182
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 48.8 bits (111), Expect = 3e-05
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY-*N*XSXXMLLNXLQ 830
GYD+ESK+FNAEVHR HI G ++ +QFS+Y N + M+ +
Sbjct: 182 GYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYK 241
Query: 831 KAHXAIRXDPXQXK 872
KAH AIR +P K
Sbjct: 242 KAHAAIRENPVYEK 255
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 208 bits (509), Expect = 2e-53
Identities = 94/145 (64%), Positives = 109/145 (75%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 45 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 104
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 105 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 164
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
+VFGA+KGAVDGGL++PHS KRFPG
Sbjct: 165 KVFGALKGAVDGGLSIPHSTKRFPG 189
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/73 (38%), Positives = 37/73 (50%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY*N*XSXXMLLNXLQK 833
GYD+ESK+FNAEVHR HI G ++ +QFS+Y + +K
Sbjct: 189 GYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMEEMYKK 248
Query: 834 AHXAIRXDPXQXK 872
AH AIR +P K
Sbjct: 249 AHAAIRENPVYEK 261
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 206 bits (504), Expect = 6e-53
Identities = 93/145 (64%), Positives = 108/145 (74%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPG 655
+VFGA+KGAVDGGL++PHS KRFPG
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPG 182
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 48.8 bits (111), Expect = 3e-05
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY-*N*XSXXMLLNXLQ 830
GYD+ESK+FNAEVHR HI G ++ +QFS+Y N + M+ +
Sbjct: 182 GYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYK 241
Query: 831 KAHXAIRXDPXQXK 872
KAH AIR +P K
Sbjct: 242 KAHAAIRENPVYEK 255
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (405), Expect = 6e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +2
Query: 260 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 439
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 440 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 619
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 620 LNVPH 634
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 118 bits (283), Expect = 4e-26
Identities = 49/61 (80%), Positives = 59/61 (96%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 A 403
A
Sbjct: 98 A 98
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 216
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 58.4 bits (135), Expect = 3e-08
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 566 TTTGARVFGAMKGAVDGGLNVPHSIKRFPG 655
TTTG +VFGA+KGAVDGGL++PHS KRFPG
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPG 30
Score = 48.8 bits (111), Expect = 3e-05
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 654 GYDAESKKFNAEVHRAHIFGFACC*IHEKS*TG**GSFXRQFSKY-*N*XSXXMLLNXLQ 830
GYD+ESK+FNAEVHR HI G ++ +QFS+Y N + M+ +
Sbjct: 30 GYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYK 89
Query: 831 KAHXAIRXDPXQXK 872
KAH AIR +P K
Sbjct: 90 KAHAAIRENPVYEK 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,957,078
Number of Sequences: 237096
Number of extensions: 2436680
Number of successful extensions: 4444
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4428
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -