Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F18
         (910 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    28   0.45 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.5  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 27.9 bits (59), Expect = 0.45
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 867 GGGFXQXGXQGGFXXGGGLGXFYXXGGGG 781
           GGG    G  GG    GG+G     GGGG
Sbjct: 653 GGGGGGGGGGGGSVGSGGIGSSSLGGGGG 681



 Score = 26.2 bits (55), Expect = 1.4
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = -2

Query: 846 GXQGGFXXGGGLGXFYXXGGGGXPPXGGXGXFFFFFXGGG 727
           G  GG   GGG G     GG G    GG G       GGG
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGG 690


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +2

Query: 650 NFXXXPPPXAXPPKRPXGXXXX*KXXPPPXKKKKKXPXPPXGGXPPPP 793
           N     PP A PP  P G        PPP          P G  PP P
Sbjct: 575 NLPNAQPPPAPPPPPPMG--------PPPSPLAGGPLGGPAGSRPPLP 614


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,488
Number of Sequences: 2352
Number of extensions: 6110
Number of successful extensions: 37
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)