Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_F15
(970 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens ... 34 0.90
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 33 1.2
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 33 1.2
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 33 1.2
BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein. 33 2.1
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 31 6.3
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 31 6.3
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 31 6.3
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 31 6.3
>AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens
cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
Length = 169
Score = 33.9 bits (74), Expect = 0.90
Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +3
Query: 732 PXGGGQXARDL*HNPPAFXPXGX--VPPXSXLPXSXXPXPRYPXXPXXXLSXPSGEKPLX 905
P G G +PP+F P PP P P YP P LS P+G P
Sbjct: 10 PVGFGSPGTPPPPSPPSFPPHPDFAAPP----PPPPPPAADYPTLPPPPLSQPTGGAP-- 63
Query: 906 XFPQXPPTPXGLXP 947
P PP P G P
Sbjct: 64 --PPPPPPPPGPPP 75
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.2
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = +3
Query: 732 PXGGGQXARDL*HNPPAFXPXGX--VPPXSXLPXSXXPXPRYPXXPXXXLSXPSGEKPLX 905
P G G +PP+F P PP P P YP P LS P+G P
Sbjct: 338 PVGFGSPGTPPPPSPPSFPPHPDFAAPP----PPPPPPAADYPTLPPPPLSQPTGGAPPP 393
Query: 906 XFPQXPPTP 932
P PP P
Sbjct: 394 PPPPPPPGP 402
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.2
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = +3
Query: 732 PXGGGQXARDL*HNPPAFXPXGX--VPPXSXLPXSXXPXPRYPXXPXXXLSXPSGEKPLX 905
P G G +PP+F P PP P P YP P LS P+G P
Sbjct: 338 PVGFGSPGTPPPPSPPSFPPHPDFAAPP----PPPPPPAADYPTLPPPPLSQPTGGAPPP 393
Query: 906 XFPQXPPTP 932
P PP P
Sbjct: 394 PPPPPPPGP 402
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.2
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = +3
Query: 732 PXGGGQXARDL*HNPPAFXPXGX--VPPXSXLPXSXXPXPRYPXXPXXXLSXPSGEKPLX 905
P G G +PP+F P PP P P YP P LS P+G P
Sbjct: 338 PVGFGSPGTPPPPSPPSFPPHPDFAAPP----PPPPPPAADYPTLPPPPLSQPTGGAPPP 393
Query: 906 XFPQXPPTP 932
P PP P
Sbjct: 394 PPPPPPPGP 402
>BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein.
Length = 162
Score = 32.7 bits (71), Expect = 2.1
Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Frame = +3
Query: 693 PGXIHDKXSDAQSPXGGGQXARDL*HNPPAFXPXGXVPPXSXLPXSXXPXPRYPXX-PXX 869
P I K + + P GG Q R PP P G P P P P P
Sbjct: 29 PSVISGKP-EGRRPQGGNQPQRT---PPPPGKPEGRPPQGGNQSQGPPPRPGKPEGQPPQ 84
Query: 870 XLSXPSGEKPLXXFPQXPPTPXGLXP 947
+ P G P PQ PP G P
Sbjct: 85 GGNKPQGPPPHPGKPQGPPPQEGNKP 110
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 6.3
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +3
Query: 774 PPAFXPXGXVPPXSXLPXSXXPXPRYPXXPXXXLSXPSGEKPLXXFPQXPPTP-XGLXP 947
PP P +PP LP + P P P P + P P P PP P G+ P
Sbjct: 1252 PPPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIPPPP-PLPRVGIPPPPPLPGAGIPP 1307
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 6.3
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +3
Query: 774 PPAFXPXGXVPPXSXLPXSXXPXPRYPXXPXXXLSXPSGEKPLXXFPQXPPTP-XGLXP 947
PP P +PP LP + P P P P + P P P PP P G+ P
Sbjct: 1252 PPPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIPPPP-PLPRVGIPPPPPLPGAGIPP 1307
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 6.3
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +3
Query: 774 PPAFXPXGXVPPXSXLPXSXXPXPRYPXXPXXXLSXPSGEKPLXXFPQXPPTP-XGLXP 947
PP P +PP LP + P P P P + P P P PP P G+ P
Sbjct: 1252 PPPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIPPPP-PLPRVGIPPPPPLPGAGIPP 1307
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 6.3
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +3
Query: 774 PPAFXPXGXVPPXSXLPXSXXPXPRYPXXPXXXLSXPSGEKPLXXFPQXPPTP-XGLXP 947
PP P +PP LP + P P P P + P P P PP P G+ P
Sbjct: 1252 PPPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIPPPP-PLPRVGIPPPPPLPGAGIPP 1307
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,919,598
Number of Sequences: 237096
Number of extensions: 1710556
Number of successful extensions: 2742
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2615
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12880737904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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