Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_F14
(866 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 198 3e-50
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 198 3e-50
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 198 3e-50
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 198 3e-50
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 198 3e-50
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 198 3e-50
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 157 5e-38
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 143 9e-34
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 93 9e-19
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 198 bits (482), Expect = 3e-50
Identities = 92/139 (66%), Positives = 104/139 (74%)
Frame = +3
Query: 180 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 359
+VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 360 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 539
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 540 VHHYKRLNTFAYKRPXTYF 596
V + F KRP T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 50.4 bits (115), Expect = 8e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 68 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSP 172
MKA G LREY+V+GR LP+ PPLY+MRIF+P
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAP 35
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 198 bits (482), Expect = 3e-50
Identities = 92/139 (66%), Positives = 104/139 (74%)
Frame = +3
Query: 180 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 359
+VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 360 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 539
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 540 VHHYKRLNTFAYKRPXTYF 596
V + F KRP T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 50.4 bits (115), Expect = 8e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 68 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSP 172
MKA G LREY+V+GR LP+ PPLY+MRIF+P
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAP 35
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 198 bits (482), Expect = 3e-50
Identities = 92/139 (66%), Positives = 104/139 (74%)
Frame = +3
Query: 180 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 359
+VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 360 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 539
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 540 VHHYKRLNTFAYKRPXTYF 596
V + F KRP T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 50.4 bits (115), Expect = 8e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 68 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSP 172
MKA G LREY+V+GR LP+ PPLY+MRIF+P
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAP 35
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 198 bits (482), Expect = 3e-50
Identities = 92/139 (66%), Positives = 104/139 (74%)
Frame = +3
Query: 180 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 359
+VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 360 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 539
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 540 VHHYKRLNTFAYKRPXTYF 596
V + F KRP T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 50.4 bits (115), Expect = 8e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 68 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSP 172
MKA G LREY+V+GR LP+ PPLY+MRIF+P
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAP 35
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 198 bits (482), Expect = 3e-50
Identities = 92/139 (66%), Positives = 104/139 (74%)
Frame = +3
Query: 180 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 359
+VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 360 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 539
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTAAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 540 VHHYKRLNTFAYKRPXTYF 596
V + F KRP T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 50.4 bits (115), Expect = 8e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 68 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSP 172
MKA G LREY+V+GR LP+ PPLY+MRIF+P
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAP 35
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 198 bits (482), Expect = 3e-50
Identities = 92/139 (66%), Positives = 104/139 (74%)
Frame = +3
Query: 180 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 359
+VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 360 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 539
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 540 VHHYKRLNTFAYKRPXTYF 596
V + F KRP T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 50.4 bits (115), Expect = 8e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 68 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSP 172
MKA G LREY+V+GR LP+ PPLY+MRIF+P
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAP 35
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 157 bits (381), Expect = 5e-38
Identities = 71/100 (71%), Positives = 79/100 (79%)
Frame = +3
Query: 297 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAA 476
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 477 CRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 596
CRRP VKQFH+S I+FPLP RV + F KRP T+F
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 143 bits (346), Expect = 9e-34
Identities = 73/131 (55%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Frame = +3
Query: 90 GNMRLSAVSSRRRTSPNL---PCIK*EFSLRXPIVAKSRFWYFLRQLKKFKKTTGEIVXX 260
G +R V RR +P P + +VAKSRFWYF+ QLKK KK++GE V
Sbjct: 5 GTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYC 64
Query: 261 XXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSI 440
NFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSI 124
Query: 441 QIIKVEVIKAA 473
QI+ VE I A+
Sbjct: 125 QIMMVEEIAAS 135
Score = 52.4 bits (120), Expect = 2e-06
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 68 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSP 172
MKA G LREY+V+GR+LP+ PPLY+MRIF+P
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPLYRMRIFAP 35
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 93.5 bits (222), Expect = 9e-19
Identities = 44/66 (66%), Positives = 50/66 (75%)
Frame = +3
Query: 399 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYK 578
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 579 RPXTYF 596
RP T+F
Sbjct: 61 RPNTFF 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,233,182
Number of Sequences: 237096
Number of extensions: 1793754
Number of successful extensions: 3776
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3776
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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